Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AC068228.1-201ENST00000461723 211 ntBASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 AC110749.1-201ENST00000462007 357 ntBASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 AC098847.1-201ENST00000473094 348 ntBASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 AC105252.1-201ENST00000503089 286 ntBASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 MTCYBP43-201ENST00000513621 740 ntBASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 AC008802.1-201ENST00000519121 791 ntBASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 OR5BC1P-201ENST00000529327 739 ntBASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 AC006960.3-201ENST00000561845 705 ntBASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 AC119403.2-201ENST00000590960 598 ntBASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 AC005084.1-201ENST00000605160 304 ntBASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 AL121757.2-201ENST00000611223 313 ntBASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 AC073348.1-201ENST00000623002 331 ntBASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 AP005264.7-201ENST00000625003 745 ntBASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 AC092111.2-201ENST00000611627 1414 ntBASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SEC61A2Q9H9S3 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 RBMY1HP-201ENST00000382759 1389 ntBASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 TMSB4XP4-201ENST00000323496 618 ntBASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 Y_RNA.453-201ENST00000384223 109 ntBASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 RNU6-876P-201ENST00000391295 104 ntBASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 AL161909.1-201ENST00000397390 712 ntBASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 MTCYBP24-201ENST00000420387 1106 ntBASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 AL139413.1-201ENST00000421309 217 ntBASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 AL590399.2-201ENST00000427536 309 ntBASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 RPS3AP38-201ENST00000435889 763 ntBASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 AL022238.1-201ENST00000442557 355 ntBASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 GDI2P2-201ENST00000445131 608 ntBASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 AL606490.1-201ENST00000452266 765 ntBASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 AC104164.1-201ENST00000460282 590 ntBASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 HMGB1P44-201ENST00000508597 572 ntBASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 RAB11AP2-201ENST00000545905 639 ntBASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 AC079905.1-201ENST00000549280 475 ntBASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 AC092332.1-201ENST00000563684 829 ntBASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 AC009101.1-201ENST00000568135 242 ntBASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 AC006504.3-201ENST00000586818 523 ntBASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 AL390838.2-201ENST00000602394 274 ntBASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 AC104458.1-201ENST00000608243 463 ntBASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 AL158209.2-201ENST00000619266 216 ntBASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 AC073488.3-201ENST00000631611 778 ntBASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 AC100871.1-201ENST00000507871 1456 ntBASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SEC61A2Q9H9S3 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.29□□□□□ -1.56
SEC61A2Q9H9S3 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms