Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 RPL7P23-201ENST00000493874 747 ntBASIC11.6□□□□□ -0.55
SCAF1Q9H7N4 RPL23AP80-201ENST00000495605 424 ntBASIC11.6□□□□□ -0.55
SCAF1Q9H7N4 RNU6-1338P-201ENST00000516328 91 ntBASIC11.6□□□□□ -0.55
SCAF1Q9H7N4 RNU2-31P-201ENST00000516954 155 ntBASIC11.6□□□□□ -0.55
SCAF1Q9H7N4 DYNLL1P4-201ENST00000549314 266 ntBASIC11.6□□□□□ -0.55
SCAF1Q9H7N4 RN7SL619P-201ENST00000581753 258 ntBASIC11.6□□□□□ -0.55
SCAF1Q9H7N4 AC015712.7-201ENST00000615211 635 ntBASIC11.6□□□□□ -0.55
SCAF1Q9H7N4 AL121985.2-201ENST00000621192 555 ntBASIC11.6□□□□□ -0.55
SCAF1Q9H7N4 SEM1-224ENST00000623693 729 ntTSL 5 BASIC11.6□□□□□ -0.55
SCAF1Q9H7N4 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC11.6□□□□□ -0.55
SCAF1Q9H7N4 U6.106-201ENST00000636360 105 ntBASIC11.6□□□□□ -0.55
SCAF1Q9H7N4 PRNT-203ENST00000423718 2096 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SCAF1Q9H7N4 ZNF585A-202ENST00000356958 6822 ntTSL 2 BASIC11.59□□□□□ -0.55
SCAF1Q9H7N4 LRP1-201ENST00000243077 14897 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SCAF1Q9H7N4 OR2AH1P-202ENST00000641232 2744 ntBASIC11.59□□□□□ -0.55
SCAF1Q9H7N4 MED6-212ENST00000615788 1700 ntTSL 5 BASIC11.59□□□□□ -0.55
SCAF1Q9H7N4 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SCAF1Q9H7N4 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SCAF1Q9H7N4 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SCAF1Q9H7N4 ZNF385D-201ENST00000281523 10699 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SCAF1Q9H7N4 EML5-201ENST00000380664 5910 ntTSL 5 BASIC11.59□□□□□ -0.55
SCAF1Q9H7N4 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SCAF1Q9H7N4 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
SCAF1Q9H7N4 AC108099.1-201ENST00000564402 3258 ntBASIC11.59□□□□□ -0.55
SCAF1Q9H7N4 DNAH11-202ENST00000409508 14167 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
SCAF1Q9H7N4 AC016251.1-201ENST00000624299 4198 ntBASIC11.59□□□□□ -0.55
SCAF1Q9H7N4 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SCAF1Q9H7N4 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC11.59□□□□□ -0.55
SCAF1Q9H7N4 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
SCAF1Q9H7N4 TDP1-203ENST00000393454 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SCAF1Q9H7N4 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
SCAF1Q9H7N4 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
SCAF1Q9H7N4 PRKAR2A-AS1-202ENST00000416209 3447 ntTSL 2 BASIC11.59□□□□□ -0.55
SCAF1Q9H7N4 FRMPD2-213ENST00000636244 4194 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
SCAF1Q9H7N4 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC11.59□□□□□ -0.55
SCAF1Q9H7N4 CTAGE11P-201ENST00000451540 2353 ntBASIC11.59□□□□□ -0.55
SCAF1Q9H7N4 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC11.59□□□□□ -0.55
SCAF1Q9H7N4 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
SCAF1Q9H7N4 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
SCAF1Q9H7N4 RNU6-179P-201ENST00000363350 107 ntBASIC11.59□□□□□ -0.55
SCAF1Q9H7N4 RNU6-666P-201ENST00000363499 107 ntBASIC11.59□□□□□ -0.55
SCAF1Q9H7N4 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
SCAF1Q9H7N4 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC11.59□□□□□ -0.55
SCAF1Q9H7N4 FTH1P10-202ENST00000430907 550 ntBASIC11.59□□□□□ -0.55
SCAF1Q9H7N4 ELOCP18-201ENST00000434209 337 ntBASIC11.59□□□□□ -0.55
SCAF1Q9H7N4 AC007849.1-201ENST00000469794 513 ntTSL 4 BASIC11.59□□□□□ -0.55
SCAF1Q9H7N4 AC110792.1-201ENST00000491826 472 ntBASIC11.59□□□□□ -0.55
SCAF1Q9H7N4 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC11.59□□□□□ -0.55
SCAF1Q9H7N4 Y_RNA.719-201ENST00000517156 106 ntBASIC11.59□□□□□ -0.55
SCAF1Q9H7N4 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
SCAF1Q9H7N4 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC11.59□□□□□ -0.55
SCAF1Q9H7N4 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC11.59□□□□□ -0.55
SCAF1Q9H7N4 AC093826.2-201ENST00000579042 108 ntBASIC11.59□□□□□ -0.55
SCAF1Q9H7N4 AC022239.4-201ENST00000602626 504 ntBASIC11.59□□□□□ -0.55
SCAF1Q9H7N4 AC090525.3-201ENST00000605601 189 ntBASIC11.59□□□□□ -0.55
SCAF1Q9H7N4 AC009779.8-202ENST00000607990 932 ntBASIC11.59□□□□□ -0.55
SCAF1Q9H7N4 AC124319.3-201ENST00000616832 526 ntBASIC11.59□□□□□ -0.55
SCAF1Q9H7N4 AC027559.1-201ENST00000636288 271 ntBASIC11.59□□□□□ -0.55
SCAF1Q9H7N4 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
SCAF1Q9H7N4 COL6A4P1-202ENST00000487147 4317 ntBASIC11.59□□□□□ -0.55
SCAF1Q9H7N4 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
SCAF1Q9H7N4 AC009044.1-201ENST00000624577 1798 ntBASIC11.58□□□□□ -0.55
SCAF1Q9H7N4 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
SCAF1Q9H7N4 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
SCAF1Q9H7N4 AC116366.1-201ENST00000443093 3730 ntTSL 5 BASIC11.58□□□□□ -0.56
SCAF1Q9H7N4 ZNF174-203ENST00000571936 1586 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
SCAF1Q9H7N4 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
SCAF1Q9H7N4 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
SCAF1Q9H7N4 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
SCAF1Q9H7N4 AC004148.2-201ENST00000575890 1938 ntTSL 5 BASIC11.58□□□□□ -0.56
SCAF1Q9H7N4 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
SCAF1Q9H7N4 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
SCAF1Q9H7N4 MRAS-211ENST00000621127 3801 ntTSL 5 BASIC11.58□□□□□ -0.56
SCAF1Q9H7N4 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
SCAF1Q9H7N4 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
SCAF1Q9H7N4 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
SCAF1Q9H7N4 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC11.58□□□□□ -0.56
SCAF1Q9H7N4 ZNF100-202ENST00000358296 5745 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
SCAF1Q9H7N4 RBMX2P2-201ENST00000257020 946 ntBASIC11.58□□□□□ -0.56
SCAF1Q9H7N4 SNORA58.1-201ENST00000364133 136 ntBASIC11.58□□□□□ -0.56
SCAF1Q9H7N4 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC11.58□□□□□ -0.56
SCAF1Q9H7N4 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC11.58□□□□□ -0.56
SCAF1Q9H7N4 AL353997.1-201ENST00000432936 108 ntBASIC11.58□□□□□ -0.56
SCAF1Q9H7N4 AC097527.1-201ENST00000437031 530 ntBASIC11.58□□□□□ -0.56
SCAF1Q9H7N4 RPSAP49-201ENST00000445182 886 ntBASIC11.58□□□□□ -0.56
SCAF1Q9H7N4 TCEAL4P1-201ENST00000453620 588 ntBASIC11.58□□□□□ -0.56
SCAF1Q9H7N4 AC108516.2-201ENST00000508163 349 ntTSL 5 BASIC11.58□□□□□ -0.56
SCAF1Q9H7N4 AC103710.2-201ENST00000609912 942 ntBASIC11.58□□□□□ -0.56
SCAF1Q9H7N4 AC016876.3-201ENST00000610459 426 ntBASIC11.58□□□□□ -0.56
SCAF1Q9H7N4 AC131159.2-201ENST00000613236 702 ntBASIC11.58□□□□□ -0.56
SCAF1Q9H7N4 MIR8075-201ENST00000614354 80 ntBASIC11.58□□□□□ -0.56
SCAF1Q9H7N4 AL353898.2-201ENST00000623000 255 ntBASIC11.58□□□□□ -0.56
SCAF1Q9H7N4 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC11.58□□□□□ -0.56
SCAF1Q9H7N4 AC139491.2-201ENST00000515403 3632 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
SCAF1Q9H7N4 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
SCAF1Q9H7N4 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC11.57□□□□□ -0.56
SCAF1Q9H7N4 AL157831.2-201ENST00000564681 3095 ntBASIC11.57□□□□□ -0.56
SCAF1Q9H7N4 GOSR2-232ENST00000640051 3964 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
SCAF1Q9H7N4 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SCAF1Q9H7N4 SALL1P1-201ENST00000438101 3837 ntBASIC11.57□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms