Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 MIR4436B1-201ENST00000583272 91 ntBASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 SS18L2P2-201ENST00000583960 235 ntBASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 AL359999.1-201ENST00000604513 294 ntBASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 AL451049.1-201ENST00000608672 497 ntBASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 AL162373.1-201ENST00000620433 407 ntBASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 FCGR3A-201ENST00000367967 2086 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 AL133320.1-201ENST00000621423 2352 ntBASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 LINC01206-202ENST00000474045 2240 ntTSL 5 BASIC6.68□□□□□ -1.34
COL25A1Q9BXS0 HMGXB4-201ENST00000216106 4047 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 PSG8-203ENST00000404209 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 CNTN4-201ENST00000397459 2322 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 ZNF595-204ENST00000609518 2115 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 AC006141.1-201ENST00000581917 2170 ntBASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 CD86-209ENST00000493101 1572 ntTSL 2 BASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 AL353807.3-201ENST00000500626 2505 ntBASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 OR10R3P-201ENST00000361688 942 ntBASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 AL645733.1-201ENST00000402250 217 ntBASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 AL589647.1-201ENST00000402485 466 ntBASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 AL136116.1-201ENST00000403591 381 ntBASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 AC130360.1-201ENST00000425489 1117 ntBASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 DUTP6-201ENST00000425573 462 ntBASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 RPL17P49-201ENST00000443728 411 ntBASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 RPL18AP17-201ENST00000455326 198 ntBASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 RPL19P11-201ENST00000495944 589 ntBASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 EIF4EP3-201ENST00000498782 656 ntBASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 HIGD1AP14-201ENST00000507617 282 ntBASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 SCARNA18.1-201ENST00000516330 83 ntBASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 IGKV1D-22-201ENST00000518953 324 ntBASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 AC130365.2-201ENST00000525882 1201 ntBASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 GTF2IP11-201ENST00000526931 420 ntBASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 TVP23CP2-201ENST00000571473 623 ntBASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 COX6CP7-201ENST00000597056 208 ntBASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 uc_338.15-201ENST00000615470 191 ntBASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 MKKS-204ENST00000639674 192 ntBASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 CD274-202ENST00000381577 3644 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 ABLIM3-207ENST00000508983 2011 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 SLC16A4-203ENST00000437429 2372 ntTSL 2 BASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 OPTN-203ENST00000378748 3521 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.67□□□□□ -1.34
COL25A1Q9BXS0 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 OR8B9P-202ENST00000642028 5216 ntBASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 AC067968.1-201ENST00000591793 3766 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 PARP2-204ENST00000527915 1980 ntTSL 2 BASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 RNU6-1120P-201ENST00000362988 108 ntBASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 RNU6-238P-201ENST00000363313 106 ntBASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 Y_RNA.339-201ENST00000365325 102 ntBASIC6.66□□□□□ -1.34
COL25A1Q9BXS0 Y_RNA.447-201ENST00000384184 113 ntBASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms