Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC10.48□□□□□ -0.73
TRIM41Q8WV44 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC10.48□□□□□ -0.73
TRIM41Q8WV44 MIR4505-201ENST00000582238 73 ntBASIC10.48□□□□□ -0.73
TRIM41Q8WV44 AP001004.1-201ENST00000582468 324 ntBASIC10.48□□□□□ -0.73
TRIM41Q8WV44 AC010487.1-201ENST00000594408 1172 ntBASIC10.48□□□□□ -0.73
TRIM41Q8WV44 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC10.48□□□□□ -0.73
TRIM41Q8WV44 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC10.48□□□□□ -0.73
TRIM41Q8WV44 AL020997.2-201ENST00000602607 184 ntBASIC10.48□□□□□ -0.73
TRIM41Q8WV44 AC138305.3-201ENST00000624988 240 ntBASIC10.48□□□□□ -0.73
TRIM41Q8WV44 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC10.48□□□□□ -0.73
TRIM41Q8WV44 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
TRIM41Q8WV44 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC10.48□□□□□ -0.73
TRIM41Q8WV44 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
TRIM41Q8WV44 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
TRIM41Q8WV44 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
TRIM41Q8WV44 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
TRIM41Q8WV44 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
TRIM41Q8WV44 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC10.48□□□□□ -0.73
TRIM41Q8WV44 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
TRIM41Q8WV44 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC10.47□□□□□ -0.73
TRIM41Q8WV44 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
TRIM41Q8WV44 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
TRIM41Q8WV44 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
TRIM41Q8WV44 HMGB1P5-201ENST00000255320 642 ntBASIC10.47□□□□□ -0.73
TRIM41Q8WV44 SNORD56.2-201ENST00000363242 71 ntBASIC10.47□□□□□ -0.73
TRIM41Q8WV44 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
TRIM41Q8WV44 MIR433-201ENST00000384837 93 ntBASIC10.47□□□□□ -0.73
TRIM41Q8WV44 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC10.47□□□□□ -0.73
TRIM41Q8WV44 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
TRIM41Q8WV44 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC10.47□□□□□ -0.73
TRIM41Q8WV44 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC10.47□□□□□ -0.73
TRIM41Q8WV44 AL663074.2-201ENST00000440621 479 ntBASIC10.47□□□□□ -0.73
TRIM41Q8WV44 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC10.47□□□□□ -0.73
TRIM41Q8WV44 AC002553.3-201ENST00000453002 341 ntBASIC10.47□□□□□ -0.73
TRIM41Q8WV44 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC10.47□□□□□ -0.73
TRIM41Q8WV44 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC10.47□□□□□ -0.73
TRIM41Q8WV44 MTCO2P4-201ENST00000517968 247 ntBASIC10.47□□□□□ -0.73
TRIM41Q8WV44 AL359212.1-201ENST00000556608 614 ntBASIC10.47□□□□□ -0.73
TRIM41Q8WV44 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC10.47□□□□□ -0.73
TRIM41Q8WV44 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC10.47□□□□□ -0.73
TRIM41Q8WV44 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC10.47□□□□□ -0.73
TRIM41Q8WV44 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
TRIM41Q8WV44 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC10.47□□□□□ -0.73
TRIM41Q8WV44 AC068880.5-201ENST00000624331 290 ntBASIC10.47□□□□□ -0.73
TRIM41Q8WV44 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC10.47□□□□□ -0.73
TRIM41Q8WV44 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
TRIM41Q8WV44 HSPA8P17-201ENST00000427029 1382 ntBASIC10.47□□□□□ -0.73
TRIM41Q8WV44 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
TRIM41Q8WV44 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
TRIM41Q8WV44 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
TRIM41Q8WV44 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC10.47□□□□□ -0.73
TRIM41Q8WV44 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC10.47□□□□□ -0.73
TRIM41Q8WV44 AP001541.1-201ENST00000623322 1904 ntBASIC10.46□□□□□ -0.73
TRIM41Q8WV44 AC117529.2-201ENST00000512159 2068 ntBASIC10.46□□□□□ -0.73
TRIM41Q8WV44 ABCA11P-202ENST00000504019 2110 ntBASIC10.46□□□□□ -0.73
TRIM41Q8WV44 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
TRIM41Q8WV44 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
TRIM41Q8WV44 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
TRIM41Q8WV44 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC10.46□□□□□ -0.73
TRIM41Q8WV44 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
TRIM41Q8WV44 ENSAP3-201ENST00000312710 333 ntBASIC10.46□□□□□ -0.73
TRIM41Q8WV44 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC10.46□□□□□ -0.73
TRIM41Q8WV44 Y_RNA.419-201ENST00000384041 102 ntBASIC10.46□□□□□ -0.73
TRIM41Q8WV44 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC10.46□□□□□ -0.73
TRIM41Q8WV44 AC130360.1-201ENST00000425489 1117 ntBASIC10.46□□□□□ -0.73
TRIM41Q8WV44 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC10.46□□□□□ -0.73
TRIM41Q8WV44 OR3D1P-201ENST00000438288 955 ntBASIC10.46□□□□□ -0.73
TRIM41Q8WV44 RPS26P30-201ENST00000443431 335 ntBASIC10.46□□□□□ -0.73
TRIM41Q8WV44 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC10.46□□□□□ -0.73
TRIM41Q8WV44 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC10.46□□□□□ -0.73
TRIM41Q8WV44 GAPDHP39-201ENST00000481866 979 ntBASIC10.46□□□□□ -0.73
TRIM41Q8WV44 RN7SKP98-201ENST00000517070 156 ntBASIC10.46□□□□□ -0.73
TRIM41Q8WV44 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC10.46□□□□□ -0.73
TRIM41Q8WV44 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC10.46□□□□□ -0.73
TRIM41Q8WV44 IGHV1-14-201ENST00000523391 241 ntBASIC10.46□□□□□ -0.73
TRIM41Q8WV44 AC130365.2-201ENST00000525882 1201 ntBASIC10.46□□□□□ -0.73
TRIM41Q8WV44 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
TRIM41Q8WV44 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC10.46□□□□□ -0.73
TRIM41Q8WV44 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC10.46□□□□□ -0.73
TRIM41Q8WV44 TAS2R6P-201ENST00000605022 826 ntBASIC10.46□□□□□ -0.73
TRIM41Q8WV44 BNIP3P10-201ENST00000605360 577 ntBASIC10.46□□□□□ -0.73
TRIM41Q8WV44 AP000648.2-201ENST00000624182 404 ntBASIC10.46□□□□□ -0.73
TRIM41Q8WV44 ATE1-AS1-202ENST00000636460 506 ntBASIC10.46□□□□□ -0.73
TRIM41Q8WV44 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.73
TRIM41Q8WV44 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
TRIM41Q8WV44 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC10.46□□□□□ -0.74
TRIM41Q8WV44 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC10.46□□□□□ -0.74
TRIM41Q8WV44 AC022325.1-201ENST00000502748 2199 ntBASIC10.46□□□□□ -0.74
TRIM41Q8WV44 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC10.46□□□□□ -0.74
TRIM41Q8WV44 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
TRIM41Q8WV44 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC10.46□□□□□ -0.74
TRIM41Q8WV44 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC10.45□□□□□ -0.74
TRIM41Q8WV44 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
TRIM41Q8WV44 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
TRIM41Q8WV44 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
TRIM41Q8WV44 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
TRIM41Q8WV44 PABPC1P8-201ENST00000452851 2086 ntBASIC10.45□□□□□ -0.74
TRIM41Q8WV44 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
TRIM41Q8WV44 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
TRIM41Q8WV44 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms