Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 AL355834.1-201ENST00000556602 3965 ntBASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 RNU5F-7P-201ENST00000363696 115 ntBASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 RNU4-91P-201ENST00000364778 135 ntBASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 MIR323B-201ENST00000385269 82 ntBASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 MRPL53P1-201ENST00000414323 319 ntBASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 AC017078.1-201ENST00000416146 368 ntBASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 RPL34P3-201ENST00000421454 338 ntBASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 VN1R54P-201ENST00000435210 1049 ntBASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 AL391987.1-201ENST00000441025 200 ntBASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 NANOGNBP1-201ENST00000448444 480 ntBASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 RBMY2TP-201ENST00000451162 947 ntBASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 YWHAEP1-201ENST00000453697 763 ntBASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 RNU7-27P-201ENST00000459281 62 ntBASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 MTCO3P38-201ENST00000468910 766 ntBASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 AC022215.1-201ENST00000481770 362 ntBASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 AC048346.1-201ENST00000510247 144 ntBASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 TCP11X3P-202ENST00000514289 1254 ntBASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 OR5D2P-201ENST00000524390 911 ntBASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 AL390816.3-201ENST00000604527 1066 ntBASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 RPL12P48-201ENST00000605620 304 ntBASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 AC093388.1-201ENST00000609166 430 ntBASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 AC126175.1-201ENST00000617041 758 ntBASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 MIR193BHG-214ENST00000641765 509 ntBASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 AL121839.2-201ENST00000565058 6943 ntBASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 AC025470.1-201ENST00000510053 2032 ntBASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
TRIM48Q8IWZ4 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 AL360270.2-201ENST00000562952 5985 ntBASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 AP004607.3-201ENST00000530354 3915 ntBASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 RN7SKP292-201ENST00000365522 317 ntBASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 SDHDP6-201ENST00000414693 480 ntBASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 AC093698.1-201ENST00000423843 571 ntBASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 AC092651.1-201ENST00000426110 312 ntBASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 AC242426.1-201ENST00000435270 960 ntBASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 AC064862.4-201ENST00000442180 334 ntBASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 AL034418.1-201ENST00000448675 860 ntBASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 AL935212.3-201ENST00000450729 284 ntBASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 AC018638.3-201ENST00000461273 132 ntBASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 RN7SL174P-201ENST00000475578 289 ntBASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 MTCYBP43-201ENST00000513621 740 ntBASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 RNU6-885P-201ENST00000516607 104 ntBASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 MIR2117-201ENST00000516780 80 ntBASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 EEF1B2P4-201ENST00000551398 348 ntBASIC5.68□□□□□ -1.5
TRIM48Q8IWZ4 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms