Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 GRAMD2B-212ENST00000513040 2196 ntTSL 2 BASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 TATDN2P3-201ENST00000452855 3665 ntBASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 IL1RL1-203ENST00000404917 3571 ntTSL 2 BASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 AC079753.1-201ENST00000623243 3868 ntBASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 Y_RNA.255-201ENST00000364581 97 ntBASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 RNA5SP132-201ENST00000364725 118 ntBASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 RNU6-169P-201ENST00000365336 107 ntBASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 MUC1-209ENST00000368396 516 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 RNU6-639P-201ENST00000384074 107 ntBASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 MIR1-2-201ENST00000384961 85 ntBASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 MIR130B-202ENST00000385018 82 ntBASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 AC078974.1-201ENST00000411597 223 ntBASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 NPM1P40-201ENST00000412758 733 ntBASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 AL451054.2-201ENST00000420896 202 ntBASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 AL645936.1-201ENST00000441979 518 ntBASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 PSPC1P2-201ENST00000455130 225 ntBASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 PABPC1P3-201ENST00000469174 459 ntBASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 UBFD1P1-201ENST00000473259 814 ntBASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 AC108471.1-201ENST00000513977 287 ntBASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 AC105417.1-201ENST00000514691 285 ntBASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 RNU6-559P-201ENST00000516151 98 ntBASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 RN7SKP256-201ENST00000517201 314 ntBASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 AC104986.1-201ENST00000517978 436 ntBASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 RPL10P14-201ENST00000565265 298 ntBASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 AC006270.2-201ENST00000578523 652 ntBASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 AC027575.3-201ENST00000583058 2747 ntBASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 TPD52-213ENST00000520527 2638 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 FSTL5-203ENST00000427802 2920 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 AC006020.1-201ENST00000420179 1854 ntBASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 AC009690.2-201ENST00000570175 3148 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC7.36□□□□□ -1.23
PRPF38BQ5VTL8 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
PRPF38BQ5VTL8 AC010401.2-201ENST00000575137 4934 ntBASIC7.35□□□□□ -1.23
PRPF38BQ5VTL8 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
PRPF38BQ5VTL8 AC020904.2-202ENST00000614660 1401 ntBASIC7.35□□□□□ -1.23
PRPF38BQ5VTL8 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
PRPF38BQ5VTL8 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
PRPF38BQ5VTL8 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
PRPF38BQ5VTL8 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC7.35□□□□□ -1.23
PRPF38BQ5VTL8 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
PRPF38BQ5VTL8 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
PRPF38BQ5VTL8 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC7.35□□□□□ -1.23
PRPF38BQ5VTL8 AC092447.10-201ENST00000620607 1652 ntBASIC7.35□□□□□ -1.23
PRPF38BQ5VTL8 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
PRPF38BQ5VTL8 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
PRPF38BQ5VTL8 AC090643.1-201ENST00000623600 3100 ntBASIC7.35□□□□□ -1.23
PRPF38BQ5VTL8 AP002800.1-201ENST00000624982 2225 ntBASIC7.35□□□□□ -1.23
PRPF38BQ5VTL8 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
PRPF38BQ5VTL8 GLYATL1P1-201ENST00000528297 1607 ntBASIC7.35□□□□□ -1.23
PRPF38BQ5VTL8 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC7.35□□□□□ -1.23
PRPF38BQ5VTL8 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
PRPF38BQ5VTL8 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
PRPF38BQ5VTL8 Y_RNA.146-201ENST00000363549 102 ntBASIC7.35□□□□□ -1.23
PRPF38BQ5VTL8 RNU6-1297P-201ENST00000384415 104 ntBASIC7.35□□□□□ -1.23
PRPF38BQ5VTL8 ZSCAN12P1-201ENST00000406489 419 ntBASIC7.35□□□□□ -1.23
PRPF38BQ5VTL8 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC7.35□□□□□ -1.23
PRPF38BQ5VTL8 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC7.35□□□□□ -1.23
PRPF38BQ5VTL8 Z82205.1-201ENST00000428456 297 ntBASIC7.35□□□□□ -1.23
PRPF38BQ5VTL8 AL772161.1-201ENST00000439130 476 ntBASIC7.35□□□□□ -1.23
PRPF38BQ5VTL8 AL035551.1-201ENST00000446931 348 ntBASIC7.35□□□□□ -1.23
PRPF38BQ5VTL8 AC004980.3-201ENST00000447046 365 ntBASIC7.35□□□□□ -1.23
PRPF38BQ5VTL8 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC7.35□□□□□ -1.23
PRPF38BQ5VTL8 RN7SL379P-201ENST00000479912 293 ntBASIC7.35□□□□□ -1.23
PRPF38BQ5VTL8 RN7SL797P-201ENST00000486314 297 ntBASIC7.35□□□□□ -1.23
PRPF38BQ5VTL8 AC018645.1-201ENST00000505003 109 ntBASIC7.35□□□□□ -1.23
PRPF38BQ5VTL8 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC7.35□□□□□ -1.23
PRPF38BQ5VTL8 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC7.35□□□□□ -1.23
PRPF38BQ5VTL8 RNU6-1220P-201ENST00000517126 108 ntBASIC7.35□□□□□ -1.23
PRPF38BQ5VTL8 IGKV3D-31-201ENST00000519131 281 ntBASIC7.35□□□□□ -1.23
PRPF38BQ5VTL8 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
PRPF38BQ5VTL8 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC7.35□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms