Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AL627308.1-201ENST00000435693 821 ntBASIC7.77□□□□□ -1.17
RC3H1Q5TC82 PGBD4P3-201ENST00000440731 581 ntBASIC7.77□□□□□ -1.17
RC3H1Q5TC82 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC7.77□□□□□ -1.17
RC3H1Q5TC82 RN7SL466P-201ENST00000497546 295 ntBASIC7.77□□□□□ -1.17
RC3H1Q5TC82 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RC3H1Q5TC82 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC7.77□□□□□ -1.17
RC3H1Q5TC82 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC7.77□□□□□ -1.17
RC3H1Q5TC82 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC7.77□□□□□ -1.17
RC3H1Q5TC82 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
RC3H1Q5TC82 WDR61-205ENST00000558459 884 ntTSL 3 BASIC7.77□□□□□ -1.17
RC3H1Q5TC82 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC7.77□□□□□ -1.17
RC3H1Q5TC82 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC7.77□□□□□ -1.17
RC3H1Q5TC82 MIR5697-201ENST00000578045 78 ntBASIC7.77□□□□□ -1.17
RC3H1Q5TC82 FO393422.1-201ENST00000603908 708 ntBASIC7.77□□□□□ -1.17
RC3H1Q5TC82 SUMO2P15-201ENST00000604285 278 ntBASIC7.77□□□□□ -1.17
RC3H1Q5TC82 AC141002.1-201ENST00000607025 279 ntBASIC7.77□□□□□ -1.17
RC3H1Q5TC82 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC7.77□□□□□ -1.17
RC3H1Q5TC82 AC005332.6-201ENST00000613178 446 ntBASIC7.77□□□□□ -1.17
RC3H1Q5TC82 C2orf27A-204ENST00000623058 969 ntBASIC7.77□□□□□ -1.17
RC3H1Q5TC82 WDR75-207ENST00000631047 270 ntTSL 5 BASIC7.77□□□□□ -1.17
RC3H1Q5TC82 AC093591.3-201ENST00000634516 308 ntBASIC7.77□□□□□ -1.17
RC3H1Q5TC82 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC7.77□□□□□ -1.17
RC3H1Q5TC82 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
RC3H1Q5TC82 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC7.77□□□□□ -1.17
RC3H1Q5TC82 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RC3H1Q5TC82 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
RC3H1Q5TC82 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
RC3H1Q5TC82 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RC3H1Q5TC82 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RC3H1Q5TC82 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RC3H1Q5TC82 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
RC3H1Q5TC82 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
RC3H1Q5TC82 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC7.76□□□□□ -1.17
RC3H1Q5TC82 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
RC3H1Q5TC82 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC7.76□□□□□ -1.17
RC3H1Q5TC82 SEC63P2-201ENST00000503863 1939 ntBASIC7.76□□□□□ -1.17
RC3H1Q5TC82 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC7.76□□□□□ -1.17
RC3H1Q5TC82 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RC3H1Q5TC82 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RC3H1Q5TC82 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
RC3H1Q5TC82 AC092725.2-201ENST00000567658 1389 ntBASIC7.76□□□□□ -1.17
RC3H1Q5TC82 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
RC3H1Q5TC82 AC078880.4-201ENST00000617627 1749 ntBASIC7.76□□□□□ -1.17
RC3H1Q5TC82 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RC3H1Q5TC82 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
RC3H1Q5TC82 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RC3H1Q5TC82 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC7.76□□□□□ -1.17
RC3H1Q5TC82 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
RC3H1Q5TC82 SNORA58B-201ENST00000364259 136 ntBASIC7.76□□□□□ -1.17
RC3H1Q5TC82 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
RC3H1Q5TC82 Y_RNA.481-201ENST00000384373 102 ntBASIC7.76□□□□□ -1.17
RC3H1Q5TC82 SNORA51.12-201ENST00000384448 134 ntBASIC7.76□□□□□ -1.17
RC3H1Q5TC82 AC025750.1-201ENST00000399891 379 ntBASIC7.76□□□□□ -1.17
RC3H1Q5TC82 MIR1284-201ENST00000408337 120 ntBASIC7.76□□□□□ -1.17
RC3H1Q5TC82 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC7.76□□□□□ -1.17
RC3H1Q5TC82 BMS1P17-202ENST00000416720 316 ntBASIC7.76□□□□□ -1.17
RC3H1Q5TC82 RPS15AP30-201ENST00000420976 390 ntBASIC7.76□□□□□ -1.17
RC3H1Q5TC82 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC7.76□□□□□ -1.17
RC3H1Q5TC82 CYCSP11-201ENST00000436426 315 ntBASIC7.76□□□□□ -1.17
RC3H1Q5TC82 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC7.76□□□□□ -1.17
RC3H1Q5TC82 ARL2BPP10-201ENST00000446487 531 ntBASIC7.76□□□□□ -1.17
RC3H1Q5TC82 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC7.76□□□□□ -1.17
RC3H1Q5TC82 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RC3H1Q5TC82 MTND5P22-201ENST00000458380 195 ntBASIC7.76□□□□□ -1.17
RC3H1Q5TC82 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC7.76□□□□□ -1.17
RC3H1Q5TC82 AC114728.1-201ENST00000488289 483 ntBASIC7.76□□□□□ -1.17
RC3H1Q5TC82 NPM1P21-201ENST00000513394 762 ntBASIC7.76□□□□□ -1.17
RC3H1Q5TC82 RNU6-1170P-201ENST00000515974 106 ntBASIC7.76□□□□□ -1.17
RC3H1Q5TC82 AC022878.1-201ENST00000530684 149 ntBASIC7.76□□□□□ -1.17
RC3H1Q5TC82 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
RC3H1Q5TC82 RPA2P3-201ENST00000533268 770 ntBASIC7.76□□□□□ -1.17
RC3H1Q5TC82 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC7.76□□□□□ -1.17
RC3H1Q5TC82 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC7.76□□□□□ -1.17
RC3H1Q5TC82 DPPA3P2-201ENST00000553589 478 ntBASIC7.76□□□□□ -1.17
RC3H1Q5TC82 AC010547.7-201ENST00000570323 333 ntBASIC7.76□□□□□ -1.17
RC3H1Q5TC82 AC027229.1-201ENST00000583887 253 ntBASIC7.76□□□□□ -1.17
RC3H1Q5TC82 H3F3BP2-201ENST00000583907 357 ntBASIC7.76□□□□□ -1.17
RC3H1Q5TC82 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC7.76□□□□□ -1.17
RC3H1Q5TC82 MIR3149-201ENST00000584629 83 ntBASIC7.76□□□□□ -1.17
RC3H1Q5TC82 AL669831.4-202ENST00000590817 238 ntBASIC7.76□□□□□ -1.17
RC3H1Q5TC82 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC7.76□□□□□ -1.17
RC3H1Q5TC82 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
RC3H1Q5TC82 AL691477.1-201ENST00000624398 162 ntBASIC7.76□□□□□ -1.17
RC3H1Q5TC82 CCT5-215ENST00000625723 135 ntTSL 5 BASIC7.76□□□□□ -1.17
RC3H1Q5TC82 ANKRD62P1-201ENST00000434304 1623 ntBASIC7.76□□□□□ -1.17
RC3H1Q5TC82 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RC3H1Q5TC82 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RC3H1Q5TC82 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
RC3H1Q5TC82 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC7.76□□□□□ -1.17
RC3H1Q5TC82 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC7.76□□□□□ -1.17
RC3H1Q5TC82 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC7.76□□□□□ -1.17
RC3H1Q5TC82 PRNCR1-201ENST00000635449 12727 ntBASIC7.76□□□□□ -1.17
RC3H1Q5TC82 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC7.76□□□□□ -1.17
RC3H1Q5TC82 EEF1A1P42-201ENST00000613436 1331 ntBASIC7.76□□□□□ -1.17
RC3H1Q5TC82 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC7.76□□□□□ -1.17
RC3H1Q5TC82 AL031985.3-201ENST00000565390 2449 ntBASIC7.76□□□□□ -1.17
RC3H1Q5TC82 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
RC3H1Q5TC82 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC7.75□□□□□ -1.17
RC3H1Q5TC82 BRCA1-201ENST00000352993 3668 ntTSL 5 BASIC7.75□□□□□ -1.17
RC3H1Q5TC82 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms