Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC244505.3-201ENST00000454598 187 ntBASIC4.96□□□□□ -1.62
NR1H2P55055 NAP1L1P3-201ENST00000462291 880 ntBASIC4.96□□□□□ -1.62
NR1H2P55055 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.96□□□□□ -1.62
NR1H2P55055 RPL7P39-201ENST00000481157 744 ntBASIC4.96□□□□□ -1.62
NR1H2P55055 RPL32P33-201ENST00000487023 394 ntBASIC4.96□□□□□ -1.62
NR1H2P55055 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.96□□□□□ -1.62
NR1H2P55055 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.96□□□□□ -1.62
NR1H2P55055 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.96□□□□□ -1.62
NR1H2P55055 AC118282.1-201ENST00000506408 765 ntBASIC4.96□□□□□ -1.62
NR1H2P55055 RNU6-488P-201ENST00000515918 99 ntBASIC4.96□□□□□ -1.62
NR1H2P55055 RNA5SP92-201ENST00000516437 110 ntBASIC4.96□□□□□ -1.62
NR1H2P55055 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.96□□□□□ -1.62
NR1H2P55055 AC091163.3-201ENST00000518269 1144 ntBASIC4.96□□□□□ -1.62
NR1H2P55055 AC034205.1-201ENST00000520621 638 ntBASIC4.96□□□□□ -1.62
NR1H2P55055 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.96□□□□□ -1.62
NR1H2P55055 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.96□□□□□ -1.62
NR1H2P55055 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.96□□□□□ -1.62
NR1H2P55055 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
NR1H2P55055 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
NR1H2P55055 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.96□□□□□ -1.62
NR1H2P55055 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.96□□□□□ -1.62
NR1H2P55055 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.96□□□□□ -1.62
NR1H2P55055 NIFKP8-201ENST00000560500 874 ntBASIC4.96□□□□□ -1.62
NR1H2P55055 AC006116.5-201ENST00000591936 559 ntBASIC4.96□□□□□ -1.62
NR1H2P55055 AC063977.5-201ENST00000601044 974 ntBASIC4.96□□□□□ -1.62
NR1H2P55055 AC112220.2-201ENST00000605513 533 ntBASIC4.96□□□□□ -1.62
NR1H2P55055 AP004247.3-201ENST00000608682 624 ntBASIC4.96□□□□□ -1.62
NR1H2P55055 AC007204.2-201ENST00000615022 616 ntBASIC4.96□□□□□ -1.62
NR1H2P55055 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.96□□□□□ -1.62
NR1H2P55055 MIR6837-201ENST00000620884 64 ntBASIC4.96□□□□□ -1.62
NR1H2P55055 AL078595.3-201ENST00000623815 1166 ntBASIC4.96□□□□□ -1.62
NR1H2P55055 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC4.96□□□□□ -1.62
NR1H2P55055 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.96□□□□□ -1.62
NR1H2P55055 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.96□□□□□ -1.62
NR1H2P55055 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NR1H2P55055 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.96□□□□□ -1.62
NR1H2P55055 LINC01355-201ENST00000566551 5444 ntBASIC4.96□□□□□ -1.62
NR1H2P55055 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.96□□□□□ -1.62
NR1H2P55055 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NR1H2P55055 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
NR1H2P55055 AC138393.1-206ENST00000540997 1886 ntBASIC4.96□□□□□ -1.62
NR1H2P55055 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NR1H2P55055 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NR1H2P55055 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.96□□□□□ -1.62
NR1H2P55055 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
NR1H2P55055 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
NR1H2P55055 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
NR1H2P55055 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.95□□□□□ -1.62
NR1H2P55055 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.95□□□□□ -1.62
NR1H2P55055 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.95□□□□□ -1.62
NR1H2P55055 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.95□□□□□ -1.62
NR1H2P55055 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
NR1H2P55055 AL159987.1-201ENST00000347911 293 ntBASIC4.95□□□□□ -1.62
NR1H2P55055 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.95□□□□□ -1.62
NR1H2P55055 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.95□□□□□ -1.62
NR1H2P55055 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NR1H2P55055 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.95□□□□□ -1.62
NR1H2P55055 AC019155.1-201ENST00000382242 574 ntBASIC4.95□□□□□ -1.62
NR1H2P55055 RNU6-1151P-201ENST00000384684 107 ntBASIC4.95□□□□□ -1.62
NR1H2P55055 AL009179.1-201ENST00000406085 265 ntBASIC4.95□□□□□ -1.62
NR1H2P55055 RPS3AP25-201ENST00000411660 793 ntBASIC4.95□□□□□ -1.62
NR1H2P55055 OR51A3P-201ENST00000413596 924 ntBASIC4.95□□□□□ -1.62
NR1H2P55055 RPS7P9-201ENST00000414704 586 ntBASIC4.95□□□□□ -1.62
NR1H2P55055 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.95□□□□□ -1.62
NR1H2P55055 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.95□□□□□ -1.62
NR1H2P55055 AC105402.2-201ENST00000438503 358 ntBASIC4.95□□□□□ -1.62
NR1H2P55055 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.95□□□□□ -1.62
NR1H2P55055 AL390119.1-201ENST00000440329 312 ntBASIC4.95□□□□□ -1.62
NR1H2P55055 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
NR1H2P55055 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.95□□□□□ -1.62
NR1H2P55055 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.95□□□□□ -1.62
NR1H2P55055 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
NR1H2P55055 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.95□□□□□ -1.62
NR1H2P55055 RN7SL51P-201ENST00000468230 285 ntBASIC4.95□□□□□ -1.62
NR1H2P55055 AC100832.1-201ENST00000471945 383 ntBASIC4.95□□□□□ -1.62
NR1H2P55055 AC022133.1-201ENST00000490961 571 ntBASIC4.95□□□□□ -1.62
NR1H2P55055 AC008953.1-201ENST00000497334 318 ntBASIC4.95□□□□□ -1.62
NR1H2P55055 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC4.95□□□□□ -1.62
NR1H2P55055 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.95□□□□□ -1.62
NR1H2P55055 HPRT1P1-201ENST00000509498 657 ntBASIC4.95□□□□□ -1.62
NR1H2P55055 snoZ278.1-201ENST00000517059 112 ntBASIC4.95□□□□□ -1.62
NR1H2P55055 AC139365.2-201ENST00000517972 253 ntBASIC4.95□□□□□ -1.62
NR1H2P55055 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.95□□□□□ -1.62
NR1H2P55055 RN7SL52P-201ENST00000584271 284 ntBASIC4.95□□□□□ -1.62
NR1H2P55055 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.95□□□□□ -1.62
NR1H2P55055 AC013244.3-201ENST00000605614 388 ntBASIC4.95□□□□□ -1.62
NR1H2P55055 AL353600.1-201ENST00000608148 251 ntBASIC4.95□□□□□ -1.62
NR1H2P55055 AC097505.1-201ENST00000610199 565 ntBASIC4.95□□□□□ -1.62
NR1H2P55055 MIR6864-201ENST00000617935 70 ntBASIC4.95□□□□□ -1.62
NR1H2P55055 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.95□□□□□ -1.62
NR1H2P55055 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.95□□□□□ -1.62
NR1H2P55055 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
NR1H2P55055 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
NR1H2P55055 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NR1H2P55055 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.95□□□□□ -1.62
NR1H2P55055 SRRM1P3-201ENST00000426911 2678 ntBASIC4.95□□□□□ -1.62
NR1H2P55055 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
NR1H2P55055 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.95□□□□□ -1.62
NR1H2P55055 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC4.94□□□□□ -1.62
NR1H2P55055 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms