Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HMGCS2P54868 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HMGCS2P54868 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
HMGCS2P54868 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HMGCS2P54868 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
HMGCS2P54868 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.89□□□□□ -1.63
HMGCS2P54868 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
HMGCS2P54868 MIR137-201ENST00000385223 102 ntBASIC4.89□□□□□ -1.63
HMGCS2P54868 MIR23A-201ENST00000385245 73 ntBASIC4.89□□□□□ -1.63
HMGCS2P54868 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.89□□□□□ -1.63
HMGCS2P54868 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.89□□□□□ -1.63
HMGCS2P54868 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.89□□□□□ -1.63
HMGCS2P54868 AC115285.1-201ENST00000424879 736 ntBASIC4.89□□□□□ -1.63
HMGCS2P54868 TRGV7-201ENST00000427089 353 ntBASIC4.89□□□□□ -1.63
HMGCS2P54868 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.89□□□□□ -1.63
HMGCS2P54868 RPL23AP46-201ENST00000438548 490 ntBASIC4.89□□□□□ -1.63
HMGCS2P54868 VN1R34P-201ENST00000447387 883 ntBASIC4.89□□□□□ -1.63
HMGCS2P54868 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.89□□□□□ -1.63
HMGCS2P54868 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.89□□□□□ -1.63
HMGCS2P54868 HPRT1P2-201ENST00000505250 544 ntBASIC4.89□□□□□ -1.63
HMGCS2P54868 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.89□□□□□ -1.63
HMGCS2P54868 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
HMGCS2P54868 AC006064.5-201ENST00000541782 248 ntBASIC4.89□□□□□ -1.63
HMGCS2P54868 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.89□□□□□ -1.63
HMGCS2P54868 AL358913.1-201ENST00000554342 121 ntBASIC4.89□□□□□ -1.63
HMGCS2P54868 AC022655.2-201ENST00000577280 318 ntBASIC4.89□□□□□ -1.63
HMGCS2P54868 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.89□□□□□ -1.63
HMGCS2P54868 AL606490.9-201ENST00000603331 271 ntBASIC4.89□□□□□ -1.63
HMGCS2P54868 AC005034.4-201ENST00000603612 899 ntBASIC4.89□□□□□ -1.63
HMGCS2P54868 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.89□□□□□ -1.63
HMGCS2P54868 AC074140.1-201ENST00000621617 208 ntBASIC4.89□□□□□ -1.63
HMGCS2P54868 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.89□□□□□ -1.63
HMGCS2P54868 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.89□□□□□ -1.63
HMGCS2P54868 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.89□□□□□ -1.63
HMGCS2P54868 AC092162.3-201ENST00000624511 1624 ntBASIC4.89□□□□□ -1.63
HMGCS2P54868 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HMGCS2P54868 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HMGCS2P54868 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.89□□□□□ -1.63
HMGCS2P54868 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HMGCS2P54868 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.89□□□□□ -1.63
HMGCS2P54868 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HMGCS2P54868 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
HMGCS2P54868 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.88□□□□□ -1.63
HMGCS2P54868 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HMGCS2P54868 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HMGCS2P54868 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
HMGCS2P54868 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HMGCS2P54868 PTMAP2-201ENST00000397627 327 ntBASIC4.88□□□□□ -1.63
HMGCS2P54868 TPT1P2-201ENST00000413105 503 ntBASIC4.88□□□□□ -1.63
HMGCS2P54868 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.88□□□□□ -1.63
HMGCS2P54868 AL445584.1-201ENST00000431451 330 ntBASIC4.88□□□□□ -1.63
HMGCS2P54868 PPIAP13-201ENST00000434706 478 ntBASIC4.88□□□□□ -1.63
HMGCS2P54868 RSL24D1P2-201ENST00000445584 366 ntBASIC4.88□□□□□ -1.63
HMGCS2P54868 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.88□□□□□ -1.63
HMGCS2P54868 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.88□□□□□ -1.63
HMGCS2P54868 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC4.88□□□□□ -1.63
HMGCS2P54868 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC4.88□□□□□ -1.63
HMGCS2P54868 AC147055.1-201ENST00000509261 750 ntBASIC4.88□□□□□ -1.63
HMGCS2P54868 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.88□□□□□ -1.63
HMGCS2P54868 SNORA48.9-201ENST00000516419 162 ntBASIC4.88□□□□□ -1.63
HMGCS2P54868 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HMGCS2P54868 AC025423.2-201ENST00000537570 439 ntBASIC4.88□□□□□ -1.63
HMGCS2P54868 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.88□□□□□ -1.63
HMGCS2P54868 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.88□□□□□ -1.63
HMGCS2P54868 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
HMGCS2P54868 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HMGCS2P54868 AC009303.3-201ENST00000591103 736 ntBASIC4.88□□□□□ -1.63
HMGCS2P54868 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
HMGCS2P54868 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.88□□□□□ -1.63
HMGCS2P54868 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.88□□□□□ -1.63
HMGCS2P54868 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
HMGCS2P54868 MTCO1P22-201ENST00000604619 1360 ntBASIC4.88□□□□□ -1.63
HMGCS2P54868 TCP11X1-202ENST00000622971 1372 ntBASIC4.88□□□□□ -1.63
HMGCS2P54868 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
HMGCS2P54868 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
HMGCS2P54868 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.87□□□□□ -1.63
HMGCS2P54868 AC010266.2-201ENST00000564741 3255 ntBASIC4.87□□□□□ -1.63
HMGCS2P54868 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HMGCS2P54868 CASC19-261ENST00000641853 1638 ntBASIC4.87□□□□□ -1.63
HMGCS2P54868 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HMGCS2P54868 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HMGCS2P54868 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.87□□□□□ -1.63
HMGCS2P54868 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.87□□□□□ -1.63
HMGCS2P54868 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
HMGCS2P54868 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.87□□□□□ -1.63
HMGCS2P54868 RNU1-44P-201ENST00000384453 163 ntBASIC4.87□□□□□ -1.63
HMGCS2P54868 SNORD66.1-201ENST00000391230 76 ntBASIC4.87□□□□□ -1.63
HMGCS2P54868 RNU4-6P-201ENST00000410804 122 ntBASIC4.87□□□□□ -1.63
HMGCS2P54868 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.87□□□□□ -1.63
HMGCS2P54868 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.87□□□□□ -1.63
HMGCS2P54868 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.87□□□□□ -1.63
HMGCS2P54868 AC007389.2-201ENST00000434630 306 ntBASIC4.87□□□□□ -1.63
HMGCS2P54868 AL358232.1-201ENST00000448030 501 ntBASIC4.87□□□□□ -1.63
HMGCS2P54868 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HMGCS2P54868 OR52A4P-203ENST00000498233 1014 ntBASIC4.87□□□□□ -1.63
HMGCS2P54868 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.87□□□□□ -1.63
HMGCS2P54868 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.87□□□□□ -1.63
HMGCS2P54868 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.87□□□□□ -1.63
HMGCS2P54868 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.87□□□□□ -1.63
HMGCS2P54868 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms