Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
BRCC3P46736 AL133268.1-201ENST00000405676 1401 ntBASIC4.65□□□□□ -1.66
BRCC3P46736 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
BRCC3P46736 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.65□□□□□ -1.66
BRCC3P46736 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
BRCC3P46736 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
BRCC3P46736 RNU6-618P-201ENST00000363518 112 ntBASIC4.65□□□□□ -1.67
BRCC3P46736 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.65□□□□□ -1.67
BRCC3P46736 MT-RNR1-201ENST00000389680 954 ntBASIC4.65□□□□□ -1.67
BRCC3P46736 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.65□□□□□ -1.67
BRCC3P46736 RN7SKP247-201ENST00000411094 308 ntBASIC4.65□□□□□ -1.67
BRCC3P46736 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.65□□□□□ -1.67
BRCC3P46736 RPL23AP38-201ENST00000423801 469 ntBASIC4.65□□□□□ -1.67
BRCC3P46736 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.65□□□□□ -1.67
BRCC3P46736 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.65□□□□□ -1.67
BRCC3P46736 MTCO1P45-201ENST00000431457 267 ntBASIC4.65□□□□□ -1.67
BRCC3P46736 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.65□□□□□ -1.67
BRCC3P46736 MAPRE1P3-201ENST00000435438 796 ntBASIC4.65□□□□□ -1.67
BRCC3P46736 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC4.65□□□□□ -1.67
BRCC3P46736 DDX39BP2-208ENST00000453923 258 ntBASIC4.65□□□□□ -1.67
BRCC3P46736 RN7SL812P-201ENST00000493791 279 ntBASIC4.65□□□□□ -1.67
BRCC3P46736 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
BRCC3P46736 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.65□□□□□ -1.67
BRCC3P46736 AC026402.1-201ENST00000513642 170 ntBASIC4.65□□□□□ -1.67
BRCC3P46736 RNA5SP49-201ENST00000516450 115 ntBASIC4.65□□□□□ -1.67
BRCC3P46736 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.65□□□□□ -1.67
BRCC3P46736 TVP23BP1-201ENST00000557500 617 ntBASIC4.65□□□□□ -1.67
BRCC3P46736 MIR3160-1-201ENST00000577972 85 ntBASIC4.65□□□□□ -1.67
BRCC3P46736 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.65□□□□□ -1.67
BRCC3P46736 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
BRCC3P46736 ZYXP1-201ENST00000617638 118 ntBASIC4.65□□□□□ -1.67
BRCC3P46736 AL445363.3-201ENST00000623080 671 ntBASIC4.65□□□□□ -1.67
BRCC3P46736 FP325313.1-201ENST00000638228 703 ntBASIC4.65□□□□□ -1.67
BRCC3P46736 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.65□□□□□ -1.67
BRCC3P46736 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
BRCC3P46736 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
BRCC3P46736 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
BRCC3P46736 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.65□□□□□ -1.67
BRCC3P46736 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
BRCC3P46736 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.65□□□□□ -1.67
BRCC3P46736 LARP1BP1-201ENST00000506036 1359 ntBASIC4.65□□□□□ -1.67
BRCC3P46736 HSPD1P14-201ENST00000432666 1618 ntBASIC4.64□□□□□ -1.67
BRCC3P46736 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.64□□□□□ -1.67
BRCC3P46736 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
BRCC3P46736 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
BRCC3P46736 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.64□□□□□ -1.67
BRCC3P46736 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
BRCC3P46736 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
BRCC3P46736 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
BRCC3P46736 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
BRCC3P46736 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
BRCC3P46736 AL589826.1-201ENST00000340697 249 ntBASIC4.64□□□□□ -1.67
BRCC3P46736 RPS26P8-201ENST00000393490 348 ntBASIC4.64□□□□□ -1.67
BRCC3P46736 RNA5SP36-201ENST00000410197 133 ntBASIC4.64□□□□□ -1.67
BRCC3P46736 RN7SKP199-201ENST00000410325 305 ntBASIC4.64□□□□□ -1.67
BRCC3P46736 RPL6P29-201ENST00000414863 865 ntBASIC4.64□□□□□ -1.67
BRCC3P46736 AL512504.1-201ENST00000415494 778 ntBASIC4.64□□□□□ -1.67
BRCC3P46736 EIF4A1P1-201ENST00000420241 934 ntBASIC4.64□□□□□ -1.67
BRCC3P46736 AL358176.3-201ENST00000420757 454 ntBASIC4.64□□□□□ -1.67
BRCC3P46736 AC062016.2-201ENST00000420950 676 ntBASIC4.64□□□□□ -1.67
BRCC3P46736 AC093084.1-201ENST00000424233 687 ntBASIC4.64□□□□□ -1.67
BRCC3P46736 MTND4LP13-201ENST00000425022 298 ntBASIC4.64□□□□□ -1.67
BRCC3P46736 RPL23AP25-201ENST00000430973 463 ntBASIC4.64□□□□□ -1.67
BRCC3P46736 OR4C10P-201ENST00000434991 931 ntBASIC4.64□□□□□ -1.67
BRCC3P46736 ARL5AP3-201ENST00000439327 386 ntBASIC4.64□□□□□ -1.67
BRCC3P46736 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.64□□□□□ -1.67
BRCC3P46736 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.64□□□□□ -1.67
BRCC3P46736 AC009963.2-201ENST00000453431 138 ntBASIC4.64□□□□□ -1.67
BRCC3P46736 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.64□□□□□ -1.67
BRCC3P46736 AC089999.1-201ENST00000460336 374 ntBASIC4.64□□□□□ -1.67
BRCC3P46736 AC020898.1-201ENST00000474167 787 ntBASIC4.64□□□□□ -1.67
BRCC3P46736 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.64□□□□□ -1.67
BRCC3P46736 ACTR6P1-201ENST00000514311 1104 ntBASIC4.64□□□□□ -1.67
BRCC3P46736 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.64□□□□□ -1.67
BRCC3P46736 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.64□□□□□ -1.67
BRCC3P46736 RPS27AP18-201ENST00000515536 459 ntBASIC4.64□□□□□ -1.67
BRCC3P46736 RNA5SP519-201ENST00000516480 119 ntBASIC4.64□□□□□ -1.67
BRCC3P46736 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC4.64□□□□□ -1.67
BRCC3P46736 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.64□□□□□ -1.67
BRCC3P46736 SNRPGP1-201ENST00000553864 222 ntBASIC4.64□□□□□ -1.67
BRCC3P46736 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.64□□□□□ -1.67
BRCC3P46736 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.64□□□□□ -1.67
BRCC3P46736 AL591034.3-201ENST00000605511 685 ntBASIC4.64□□□□□ -1.67
BRCC3P46736 AC025175.1-201ENST00000606482 759 ntBASIC4.64□□□□□ -1.67
BRCC3P46736 Z98200.1-201ENST00000607298 470 ntBASIC4.64□□□□□ -1.67
BRCC3P46736 AL121890.2-201ENST00000617644 465 ntBASIC4.64□□□□□ -1.67
BRCC3P46736 AC015722.2-201ENST00000622210 551 ntBASIC4.64□□□□□ -1.67
BRCC3P46736 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
BRCC3P46736 AP001273.1-201ENST00000624493 3152 ntBASIC4.64□□□□□ -1.67
BRCC3P46736 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
BRCC3P46736 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
BRCC3P46736 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.64□□□□□ -1.67
BRCC3P46736 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
BRCC3P46736 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
BRCC3P46736 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.64□□□□□ -1.67
BRCC3P46736 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
BRCC3P46736 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
BRCC3P46736 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
BRCC3P46736 AL606537.1-201ENST00000607258 2011 ntBASIC4.63□□□□□ -1.67
BRCC3P46736 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms