Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL18A1P39060 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL18A1P39060 AC245052.5-201ENST00000416320 649 ntBASIC5.29□□□□□ -1.56
COL18A1P39060 Z97055.1-201ENST00000419730 712 ntBASIC5.29□□□□□ -1.56
COL18A1P39060 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.29□□□□□ -1.56
COL18A1P39060 RPL7P4-203ENST00000430239 730 ntBASIC5.29□□□□□ -1.56
COL18A1P39060 AC112206.1-201ENST00000468416 477 ntBASIC5.29□□□□□ -1.56
COL18A1P39060 RPL7P24-201ENST00000493052 752 ntBASIC5.29□□□□□ -1.56
COL18A1P39060 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.29□□□□□ -1.56
COL18A1P39060 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.29□□□□□ -1.56
COL18A1P39060 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.29□□□□□ -1.56
COL18A1P39060 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL18A1P39060 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL18A1P39060 AC016957.2-201ENST00000616998 848 ntBASIC5.29□□□□□ -1.56
COL18A1P39060 MIR7702-201ENST00000621931 59 ntBASIC5.29□□□□□ -1.56
COL18A1P39060 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.29□□□□□ -1.56
COL18A1P39060 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.29□□□□□ -1.56
COL18A1P39060 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC5.29□□□□□ -1.56
COL18A1P39060 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
COL18A1P39060 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
COL18A1P39060 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC5.28□□□□□ -1.56
COL18A1P39060 FABP3P2-201ENST00000453169 399 ntBASIC5.28□□□□□ -1.56
COL18A1P39060 DEFB109F-201ENST00000491870 277 ntBASIC5.28□□□□□ -1.56
COL18A1P39060 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC5.28□□□□□ -1.56
COL18A1P39060 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.28□□□□□ -1.56
COL18A1P39060 AC138938.1-201ENST00000515431 782 ntBASIC5.28□□□□□ -1.56
COL18A1P39060 AC008759.1-201ENST00000589783 983 ntBASIC5.28□□□□□ -1.56
COL18A1P39060 AC005344.1-201ENST00000613391 459 ntBASIC5.28□□□□□ -1.56
COL18A1P39060 AL138721.1-201ENST00000616756 179 ntBASIC5.28□□□□□ -1.56
COL18A1P39060 AC022106.2-201ENST00000620114 757 ntBASIC5.28□□□□□ -1.56
COL18A1P39060 MIR3651-201ENST00000630427 90 ntBASIC5.28□□□□□ -1.56
COL18A1P39060 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL18A1P39060 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.28□□□□□ -1.56
COL18A1P39060 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
COL18A1P39060 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
COL18A1P39060 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL18A1P39060 AC058791.1-201ENST00000608412 3198 ntBASIC5.27□□□□□ -1.57
COL18A1P39060 TCEA1P2-201ENST00000420496 906 ntBASIC5.27□□□□□ -1.57
COL18A1P39060 PDSS1P1-201ENST00000422953 1114 ntBASIC5.27□□□□□ -1.57
COL18A1P39060 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
COL18A1P39060 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC5.27□□□□□ -1.57
COL18A1P39060 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC5.27□□□□□ -1.57
COL18A1P39060 MIR3922-201ENST00000585192 84 ntBASIC5.27□□□□□ -1.57
COL18A1P39060 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.27□□□□□ -1.57
COL18A1P39060 AL391497.1-201ENST00000608671 547 ntBASIC5.27□□□□□ -1.57
COL18A1P39060 AC015922.4-201ENST00000612568 690 ntBASIC5.27□□□□□ -1.57
COL18A1P39060 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL18A1P39060 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL18A1P39060 AC073346.2-201ENST00000624724 2058 ntBASIC5.27□□□□□ -1.57
COL18A1P39060 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL18A1P39060 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.27□□□□□ -1.57
COL18A1P39060 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL18A1P39060 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
COL18A1P39060 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.27□□□□□ -1.57
COL18A1P39060 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC5.27□□□□□ -1.57
COL18A1P39060 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
COL18A1P39060 RNA5SP51-201ENST00000364750 119 ntBASIC5.27□□□□□ -1.57
COL18A1P39060 SSR1P1-201ENST00000407630 814 ntBASIC5.27□□□□□ -1.57
COL18A1P39060 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.27□□□□□ -1.57
COL18A1P39060 RBMY1KP-201ENST00000423480 476 ntBASIC5.27□□□□□ -1.57
COL18A1P39060 PRDX3P3-201ENST00000447765 522 ntBASIC5.27□□□□□ -1.57
COL18A1P39060 AC104978.1-201ENST00000449387 391 ntBASIC5.27□□□□□ -1.57
COL18A1P39060 AC115115.1-201ENST00000449927 248 ntBASIC5.27□□□□□ -1.57
COL18A1P39060 CYCSP53-201ENST00000455540 265 ntBASIC5.27□□□□□ -1.57
COL18A1P39060 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.27□□□□□ -1.57
COL18A1P39060 AC104619.4-201ENST00000510773 249 ntBASIC5.27□□□□□ -1.57
COL18A1P39060 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC5.27□□□□□ -1.57
COL18A1P39060 ZNF415P1-201ENST00000582279 1166 ntBASIC5.27□□□□□ -1.57
COL18A1P39060 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC5.27□□□□□ -1.57
COL18A1P39060 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC5.27□□□□□ -1.57
COL18A1P39060 AC090246.1-201ENST00000616499 426 ntBASIC5.27□□□□□ -1.57
COL18A1P39060 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.27□□□□□ -1.57
COL18A1P39060 AC005858.4-201ENST00000623191 700 ntBASIC5.27□□□□□ -1.57
COL18A1P39060 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC5.27□□□□□ -1.57
COL18A1P39060 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL18A1P39060 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
COL18A1P39060 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL18A1P39060 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
COL18A1P39060 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL18A1P39060 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
COL18A1P39060 AC097634.1-201ENST00000604491 2467 ntBASIC5.26□□□□□ -1.57
COL18A1P39060 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.26□□□□□ -1.57
COL18A1P39060 SOD2P1-201ENST00000396543 562 ntBASIC5.26□□□□□ -1.57
COL18A1P39060 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC5.26□□□□□ -1.57
COL18A1P39060 Z74696.2-201ENST00000436514 498 ntBASIC5.26□□□□□ -1.57
COL18A1P39060 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.26□□□□□ -1.57
COL18A1P39060 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC5.26□□□□□ -1.57
COL18A1P39060 PPIAP3-201ENST00000450588 505 ntBASIC5.26□□□□□ -1.57
COL18A1P39060 AL133162.1-201ENST00000463228 453 ntBASIC5.26□□□□□ -1.57
COL18A1P39060 PLGLA-201ENST00000465668 449 ntBASIC5.26□□□□□ -1.57
COL18A1P39060 AC108022.1-201ENST00000493466 478 ntBASIC5.26□□□□□ -1.57
COL18A1P39060 AC074250.1-201ENST00000511117 192 ntBASIC5.26□□□□□ -1.57
COL18A1P39060 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.26□□□□□ -1.57
COL18A1P39060 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC5.26□□□□□ -1.57
COL18A1P39060 AC007599.1-201ENST00000568688 1174 ntBASIC5.26□□□□□ -1.57
COL18A1P39060 AC012417.1-201ENST00000582307 1039 ntBASIC5.26□□□□□ -1.57
COL18A1P39060 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.26□□□□□ -1.57
COL18A1P39060 AC138907.10-201ENST00000623708 983 ntBASIC5.26□□□□□ -1.57
COL18A1P39060 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
COL18A1P39060 AC005005.4-201ENST00000623789 16698 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms