Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HOXC13P31276 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HOXC13P31276 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HOXC13P31276 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HOXC13P31276 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.02□□□□□ -1.61
HOXC13P31276 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
HOXC13P31276 PNPT1P2-201ENST00000456768 2050 ntBASIC5.01□□□□□ -1.61
HOXC13P31276 AC006042.3-201ENST00000454684 1469 ntBASIC5.01□□□□□ -1.61
HOXC13P31276 AC100871.1-201ENST00000507871 1456 ntBASIC5.01□□□□□ -1.61
HOXC13P31276 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.01□□□□□ -1.61
HOXC13P31276 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.01□□□□□ -1.61
HOXC13P31276 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
HOXC13P31276 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
HOXC13P31276 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HOXC13P31276 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.01□□□□□ -1.61
HOXC13P31276 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HOXC13P31276 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HOXC13P31276 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.01□□□□□ -1.61
HOXC13P31276 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.01□□□□□ -1.61
HOXC13P31276 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HOXC13P31276 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.01□□□□□ -1.61
HOXC13P31276 VN1R37P-201ENST00000419096 748 ntBASIC5.01□□□□□ -1.61
HOXC13P31276 RPL23AP1-201ENST00000428990 471 ntBASIC5.01□□□□□ -1.61
HOXC13P31276 AL513321.1-201ENST00000441175 761 ntBASIC5.01□□□□□ -1.61
HOXC13P31276 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC5.01□□□□□ -1.61
HOXC13P31276 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.01□□□□□ -1.61
HOXC13P31276 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HOXC13P31276 OR1H1P-201ENST00000448731 937 ntBASIC5.01□□□□□ -1.61
HOXC13P31276 AURKAPS2-201ENST00000454983 333 ntBASIC5.01□□□□□ -1.61
HOXC13P31276 RPL37P3-201ENST00000456825 293 ntBASIC5.01□□□□□ -1.61
HOXC13P31276 AC104687.1-201ENST00000485829 412 ntBASIC5.01□□□□□ -1.61
HOXC13P31276 AC107398.1-201ENST00000486904 505 ntBASIC5.01□□□□□ -1.61
HOXC13P31276 RN7SL558P-201ENST00000497468 299 ntBASIC5.01□□□□□ -1.61
HOXC13P31276 AK3P4-201ENST00000504283 583 ntBASIC5.01□□□□□ -1.61
HOXC13P31276 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
HOXC13P31276 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.01□□□□□ -1.61
HOXC13P31276 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.01□□□□□ -1.61
HOXC13P31276 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.01□□□□□ -1.61
HOXC13P31276 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
HOXC13P31276 DEFB109D-201ENST00000529497 240 ntBASIC5.01□□□□□ -1.61
HOXC13P31276 AC004923.2-201ENST00000529649 369 ntBASIC5.01□□□□□ -1.61
HOXC13P31276 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.01□□□□□ -1.61
HOXC13P31276 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.01□□□□□ -1.61
HOXC13P31276 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.01□□□□□ -1.61
HOXC13P31276 AC068831.4-201ENST00000556118 109 ntBASIC5.01□□□□□ -1.61
HOXC13P31276 AL049839.1-201ENST00000556151 657 ntBASIC5.01□□□□□ -1.61
HOXC13P31276 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
HOXC13P31276 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.01□□□□□ -1.61
HOXC13P31276 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.01□□□□□ -1.61
HOXC13P31276 AL109741.3-201ENST00000561748 592 ntBASIC5.01□□□□□ -1.61
HOXC13P31276 AC233266.2-201ENST00000567067 528 ntBASIC5.01□□□□□ -1.61
HOXC13P31276 AC136624.4-201ENST00000573044 370 ntBASIC5.01□□□□□ -1.61
HOXC13P31276 MIR4284-201ENST00000578924 81 ntBASIC5.01□□□□□ -1.61
HOXC13P31276 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.01□□□□□ -1.61
HOXC13P31276 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.01□□□□□ -1.61
HOXC13P31276 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC5.01□□□□□ -1.61
HOXC13P31276 AC098935.2-201ENST00000604222 466 ntBASIC5.01□□□□□ -1.61
HOXC13P31276 AL109618.2-201ENST00000605527 211 ntBASIC5.01□□□□□ -1.61
HOXC13P31276 MLECP1-201ENST00000615893 709 ntBASIC5.01□□□□□ -1.61
HOXC13P31276 AP004607.9-201ENST00000618202 316 ntBASIC5.01□□□□□ -1.61
HOXC13P31276 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.01□□□□□ -1.61
HOXC13P31276 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HOXC13P31276 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HOXC13P31276 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HOXC13P31276 AL121839.2-201ENST00000565058 6943 ntBASIC5□□□□□ -1.61
HOXC13P31276 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HOXC13P31276 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5□□□□□ -1.61
HOXC13P31276 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
HOXC13P31276 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HOXC13P31276 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
HOXC13P31276 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
HOXC13P31276 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HOXC13P31276 U3.30-201ENST00000391308 210 ntBASIC5□□□□□ -1.61
HOXC13P31276 AL049697.2-201ENST00000403708 294 ntBASIC5□□□□□ -1.61
HOXC13P31276 RPL21P108-201ENST00000413857 481 ntBASIC5□□□□□ -1.61
HOXC13P31276 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5□□□□□ -1.61
HOXC13P31276 LINC00993-201ENST00000420453 540 ntBASIC5□□□□□ -1.61
HOXC13P31276 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5□□□□□ -1.61
HOXC13P31276 AC012519.1-201ENST00000424588 610 ntBASIC5□□□□□ -1.61
HOXC13P31276 AL031736.2-201ENST00000426573 787 ntBASIC5□□□□□ -1.61
HOXC13P31276 AC004975.1-201ENST00000428733 208 ntBASIC5□□□□□ -1.61
HOXC13P31276 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC5□□□□□ -1.61
HOXC13P31276 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5□□□□□ -1.61
HOXC13P31276 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5□□□□□ -1.61
HOXC13P31276 GTF3AP5-201ENST00000442645 697 ntBASIC5□□□□□ -1.61
HOXC13P31276 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5□□□□□ -1.61
HOXC13P31276 AC234781.3-201ENST00000452540 973 ntBASIC5□□□□□ -1.61
HOXC13P31276 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5□□□□□ -1.61
HOXC13P31276 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC5□□□□□ -1.61
HOXC13P31276 AC025674.1-201ENST00000507074 324 ntBASIC5□□□□□ -1.61
HOXC13P31276 RN7SKP21-201ENST00000516503 220 ntBASIC5□□□□□ -1.61
HOXC13P31276 SOX5P1-201ENST00000524155 1127 ntBASIC5□□□□□ -1.61
HOXC13P31276 AP002812.4-201ENST00000532139 286 ntBASIC5□□□□□ -1.61
HOXC13P31276 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5□□□□□ -1.61
HOXC13P31276 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5□□□□□ -1.61
HOXC13P31276 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC5□□□□□ -1.61
HOXC13P31276 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC5□□□□□ -1.61
HOXC13P31276 RN7SL802P-201ENST00000577858 299 ntBASIC5□□□□□ -1.61
HOXC13P31276 CBX3P2-202ENST00000583365 535 ntBASIC5□□□□□ -1.61
HOXC13P31276 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms