Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 LINC02495-203ENST00000636704 242 ntBASIC5.67□□□□□ -1.5
HOXC12P31275 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
HOXC12P31275 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXC12P31275 AC022034.1-201ENST00000512867 2156 ntBASIC5.67□□□□□ -1.5
HOXC12P31275 LARP1B-201ENST00000326639 4891 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
HOXC12P31275 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXC12P31275 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
HOXC12P31275 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
HOXC12P31275 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.66□□□□□ -1.5
HOXC12P31275 MAPK10-344ENST00000641718 3746 ntBASIC5.66□□□□□ -1.5
HOXC12P31275 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC5.66□□□□□ -1.5
HOXC12P31275 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.66□□□□□ -1.5
HOXC12P31275 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXC12P31275 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXC12P31275 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HOXC12P31275 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.66□□□□□ -1.5
HOXC12P31275 AC083843.2-201ENST00000568248 6253 ntBASIC5.66□□□□□ -1.5
HOXC12P31275 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.66□□□□□ -1.5
HOXC12P31275 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXC12P31275 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.66□□□□□ -1.5
HOXC12P31275 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HOXC12P31275 GAPDHP24-201ENST00000328713 983 ntBASIC5.66□□□□□ -1.5
HOXC12P31275 SNORA51.1-201ENST00000363243 140 ntBASIC5.66□□□□□ -1.5
HOXC12P31275 RNU4-12P-201ENST00000365233 139 ntBASIC5.66□□□□□ -1.5
HOXC12P31275 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC5.66□□□□□ -1.5
HOXC12P31275 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
HOXC12P31275 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXC12P31275 AC004386.1-201ENST00000393214 761 ntBASIC5.66□□□□□ -1.5
HOXC12P31275 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
HOXC12P31275 GAPDHP42-201ENST00000406848 981 ntBASIC5.66□□□□□ -1.5
HOXC12P31275 AP000534.2-201ENST00000412729 568 ntBASIC5.66□□□□□ -1.5
HOXC12P31275 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC5.66□□□□□ -1.5
HOXC12P31275 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC5.66□□□□□ -1.5
HOXC12P31275 AL157884.1-201ENST00000424561 454 ntBASIC5.66□□□□□ -1.5
HOXC12P31275 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXC12P31275 RPSAP65-201ENST00000429660 595 ntBASIC5.66□□□□□ -1.5
HOXC12P31275 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC5.66□□□□□ -1.5
HOXC12P31275 LSM1P1-201ENST00000438629 273 ntBASIC5.66□□□□□ -1.5
HOXC12P31275 AC073909.1-201ENST00000447112 999 ntBASIC5.66□□□□□ -1.5
HOXC12P31275 VN1R34P-201ENST00000447387 883 ntBASIC5.66□□□□□ -1.5
HOXC12P31275 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC5.66□□□□□ -1.5
HOXC12P31275 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC5.66□□□□□ -1.5
HOXC12P31275 HMGN3P1-201ENST00000453847 193 ntBASIC5.66□□□□□ -1.5
HOXC12P31275 AL121769.1-201ENST00000469473 401 ntBASIC5.66□□□□□ -1.5
HOXC12P31275 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.66□□□□□ -1.5
HOXC12P31275 RPL21P6-201ENST00000479171 504 ntBASIC5.66□□□□□ -1.5
HOXC12P31275 RN7SL101P-201ENST00000496350 279 ntBASIC5.66□□□□□ -1.5
HOXC12P31275 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.66□□□□□ -1.5
HOXC12P31275 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.66□□□□□ -1.5
HOXC12P31275 POU5F1P7-201ENST00000508759 541 ntBASIC5.66□□□□□ -1.5
HOXC12P31275 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.66□□□□□ -1.5
HOXC12P31275 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC5.66□□□□□ -1.5
HOXC12P31275 AC068587.4-201ENST00000533893 186 ntBASIC5.66□□□□□ -1.5
HOXC12P31275 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.66□□□□□ -1.5
HOXC12P31275 DPPA2P4-201ENST00000563717 878 ntBASIC5.66□□□□□ -1.5
HOXC12P31275 BGLT3-201ENST00000564523 994 ntBASIC5.66□□□□□ -1.5
HOXC12P31275 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXC12P31275 MIR3614-201ENST00000581261 86 ntBASIC5.66□□□□□ -1.5
HOXC12P31275 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.66□□□□□ -1.5
HOXC12P31275 VN1R79P-201ENST00000593540 513 ntBASIC5.66□□□□□ -1.5
HOXC12P31275 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC5.66□□□□□ -1.5
HOXC12P31275 AC090578.1-201ENST00000604955 591 ntBASIC5.66□□□□□ -1.5
HOXC12P31275 AL158209.2-201ENST00000619266 216 ntBASIC5.66□□□□□ -1.5
HOXC12P31275 PACRG-211ENST00000621363 360 ntTSL 5 BASIC5.66□□□□□ -1.5
HOXC12P31275 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC5.66□□□□□ -1.5
HOXC12P31275 AP001005.3-201ENST00000622049 129 ntBASIC5.66□□□□□ -1.5
HOXC12P31275 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.66□□□□□ -1.5
HOXC12P31275 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC5.66□□□□□ -1.5
HOXC12P31275 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXC12P31275 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXC12P31275 AC013488.1-201ENST00000526618 1838 ntBASIC5.66□□□□□ -1.5
HOXC12P31275 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.66□□□□□ -1.5
HOXC12P31275 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HOXC12P31275 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXC12P31275 AC092162.3-201ENST00000624511 1624 ntBASIC5.66□□□□□ -1.5
HOXC12P31275 AC144833.1-201ENST00000567953 4089 ntBASIC5.66□□□□□ -1.5
HOXC12P31275 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.66□□□□□ -1.5
HOXC12P31275 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXC12P31275 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXC12P31275 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXC12P31275 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
HOXC12P31275 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.66□□□□□ -1.5
HOXC12P31275 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
HOXC12P31275 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
HOXC12P31275 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
HOXC12P31275 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HOXC12P31275 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HOXC12P31275 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HOXC12P31275 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.65□□□□□ -1.5
HOXC12P31275 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HOXC12P31275 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.65□□□□□ -1.5
HOXC12P31275 RNA5SP333-201ENST00000363466 118 ntBASIC5.65□□□□□ -1.5
HOXC12P31275 RNA5SP334-201ENST00000364825 118 ntBASIC5.65□□□□□ -1.5
HOXC12P31275 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
HOXC12P31275 RNU6-444P-201ENST00000383988 108 ntBASIC5.65□□□□□ -1.5
HOXC12P31275 AL512422.1-201ENST00000407033 553 ntBASIC5.65□□□□□ -1.5
HOXC12P31275 MIR320C1-201ENST00000408566 88 ntBASIC5.65□□□□□ -1.5
HOXC12P31275 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC5.65□□□□□ -1.5
HOXC12P31275 AL035422.1-201ENST00000414193 397 ntBASIC5.65□□□□□ -1.5
HOXC12P31275 PRELID3BP11-201ENST00000414230 479 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms