Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AC039056.2-201ENST00000622261 511 ntBASIC5.51□□□□□ -1.53
TM4SF1P30408 AC100778.3-201ENST00000580060 1750 ntBASIC5.51□□□□□ -1.53
TM4SF1P30408 AC011755.1-201ENST00000623763 2049 ntBASIC5.51□□□□□ -1.53
TM4SF1P30408 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TM4SF1P30408 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TM4SF1P30408 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
TM4SF1P30408 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
TM4SF1P30408 AL603750.1-201ENST00000624216 1717 ntBASIC5.51□□□□□ -1.53
TM4SF1P30408 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TM4SF1P30408 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TM4SF1P30408 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.5□□□□□ -1.53
TM4SF1P30408 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.5□□□□□ -1.53
TM4SF1P30408 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
TM4SF1P30408 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.5□□□□□ -1.53
TM4SF1P30408 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
TM4SF1P30408 AL133243.3-201ENST00000617415 3004 ntBASIC5.5□□□□□ -1.53
TM4SF1P30408 5S_rRNA.1-201ENST00000364415 116 ntBASIC5.5□□□□□ -1.53
TM4SF1P30408 RN7SKP235-201ENST00000410662 305 ntBASIC5.5□□□□□ -1.53
TM4SF1P30408 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC5.5□□□□□ -1.53
TM4SF1P30408 REREP1Y-201ENST00000422655 198 ntBASIC5.5□□□□□ -1.53
TM4SF1P30408 HMGB3P5-201ENST00000428894 612 ntBASIC5.5□□□□□ -1.53
TM4SF1P30408 RPL5P2-201ENST00000429598 854 ntBASIC5.5□□□□□ -1.53
TM4SF1P30408 REREP2Y-201ENST00000439103 200 ntBASIC5.5□□□□□ -1.53
TM4SF1P30408 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC5.5□□□□□ -1.53
TM4SF1P30408 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.5□□□□□ -1.53
TM4SF1P30408 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.5□□□□□ -1.53
TM4SF1P30408 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.5□□□□□ -1.53
TM4SF1P30408 ASNSP4-201ENST00000511103 447 ntBASIC5.5□□□□□ -1.53
TM4SF1P30408 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.5□□□□□ -1.53
TM4SF1P30408 AC099522.1-202ENST00000514718 367 ntBASIC5.5□□□□□ -1.53
TM4SF1P30408 RNA5SP249-201ENST00000516127 99 ntBASIC5.5□□□□□ -1.53
TM4SF1P30408 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC5.5□□□□□ -1.53
TM4SF1P30408 AC079148.1-201ENST00000565944 819 ntBASIC5.5□□□□□ -1.53
TM4SF1P30408 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.5□□□□□ -1.53
TM4SF1P30408 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.5□□□□□ -1.53
TM4SF1P30408 AC119674.1-212ENST00000641155 993 ntBASIC5.5□□□□□ -1.53
TM4SF1P30408 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
TM4SF1P30408 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.5□□□□□ -1.53
TM4SF1P30408 AL512283.1-201ENST00000606756 1384 ntBASIC5.5□□□□□ -1.53
TM4SF1P30408 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TM4SF1P30408 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
TM4SF1P30408 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.5□□□□□ -1.53
TM4SF1P30408 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
TM4SF1P30408 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.5□□□□□ -1.53
TM4SF1P30408 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
TM4SF1P30408 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
TM4SF1P30408 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TM4SF1P30408 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TM4SF1P30408 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TM4SF1P30408 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TM4SF1P30408 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
TM4SF1P30408 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TM4SF1P30408 SNORA5.1-201ENST00000384275 131 ntBASIC5.49□□□□□ -1.53
TM4SF1P30408 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
TM4SF1P30408 SNORA40.4-201ENST00000390971 128 ntBASIC5.49□□□□□ -1.53
TM4SF1P30408 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.49□□□□□ -1.53
TM4SF1P30408 GCA-203ENST00000429691 824 ntTSL 3 BASIC5.49□□□□□ -1.53
TM4SF1P30408 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.49□□□□□ -1.53
TM4SF1P30408 AL512326.1-201ENST00000443050 721 ntBASIC5.49□□□□□ -1.53
TM4SF1P30408 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.49□□□□□ -1.53
TM4SF1P30408 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC5.49□□□□□ -1.53
TM4SF1P30408 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC5.49□□□□□ -1.53
TM4SF1P30408 SNORA76.2-201ENST00000517095 137 ntBASIC5.49□□□□□ -1.53
TM4SF1P30408 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.49□□□□□ -1.53
TM4SF1P30408 AP003049.1-201ENST00000529418 457 ntBASIC5.49□□□□□ -1.53
TM4SF1P30408 AC004923.2-201ENST00000529649 369 ntBASIC5.49□□□□□ -1.53
TM4SF1P30408 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5.49□□□□□ -1.53
TM4SF1P30408 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.49□□□□□ -1.53
TM4SF1P30408 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.49□□□□□ -1.53
TM4SF1P30408 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC5.49□□□□□ -1.53
TM4SF1P30408 AC090181.2-201ENST00000602975 672 ntBASIC5.49□□□□□ -1.53
TM4SF1P30408 LSM1P2-201ENST00000604911 322 ntBASIC5.49□□□□□ -1.53
TM4SF1P30408 FAM27D1-201ENST00000612308 341 ntBASIC5.49□□□□□ -1.53
TM4SF1P30408 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
TM4SF1P30408 AC080188.3-201ENST00000624842 748 ntBASIC5.49□□□□□ -1.53
TM4SF1P30408 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC5.49□□□□□ -1.53
TM4SF1P30408 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC5.49□□□□□ -1.53
TM4SF1P30408 AP001153.1-201ENST00000641024 338 ntBASIC5.49□□□□□ -1.53
TM4SF1P30408 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.49□□□□□ -1.53
TM4SF1P30408 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.49□□□□□ -1.53
TM4SF1P30408 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TM4SF1P30408 RLIMP1-201ENST00000339626 1680 ntBASIC5.49□□□□□ -1.53
TM4SF1P30408 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TM4SF1P30408 CASC19-284ENST00000642142 1868 ntBASIC5.49□□□□□ -1.53
TM4SF1P30408 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
TM4SF1P30408 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
TM4SF1P30408 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.49□□□□□ -1.53
TM4SF1P30408 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
TM4SF1P30408 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.48□□□□□ -1.53
TM4SF1P30408 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
TM4SF1P30408 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
TM4SF1P30408 AL355852.1-201ENST00000454081 1771 ntBASIC5.48□□□□□ -1.53
TM4SF1P30408 OR56B2P-201ENST00000317102 954 ntBASIC5.48□□□□□ -1.53
TM4SF1P30408 RNU1-14P-201ENST00000362759 152 ntBASIC5.48□□□□□ -1.53
TM4SF1P30408 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.48□□□□□ -1.53
TM4SF1P30408 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
TM4SF1P30408 RNU4-31P-201ENST00000384211 141 ntBASIC5.48□□□□□ -1.53
TM4SF1P30408 TAF9BP2-201ENST00000400856 499 ntBASIC5.48□□□□□ -1.53
TM4SF1P30408 AL080315.1-201ENST00000406055 466 ntBASIC5.48□□□□□ -1.53
TM4SF1P30408 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms