Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC7.11□□□□□ -1.27
RXRBP28702 CFTRP1-201ENST00000456646 183 ntBASIC7.11□□□□□ -1.27
RXRBP28702 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC7.11□□□□□ -1.27
RXRBP28702 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC7.11□□□□□ -1.27
RXRBP28702 RPL5P12-201ENST00000477071 851 ntBASIC7.11□□□□□ -1.27
RXRBP28702 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC7.11□□□□□ -1.27
RXRBP28702 MTCYBP19-201ENST00000517463 1124 ntBASIC7.11□□□□□ -1.27
RXRBP28702 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC7.11□□□□□ -1.27
RXRBP28702 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC7.11□□□□□ -1.27
RXRBP28702 MED28P5-201ENST00000528254 438 ntBASIC7.11□□□□□ -1.27
RXRBP28702 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC7.11□□□□□ -1.27
RXRBP28702 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC7.11□□□□□ -1.27
RXRBP28702 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC7.11□□□□□ -1.27
RXRBP28702 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC7.11□□□□□ -1.27
RXRBP28702 CASC16-202ENST00000563844 610 ntTSL 3 BASIC7.11□□□□□ -1.27
RXRBP28702 AC012414.6-201ENST00000568241 401 ntBASIC7.11□□□□□ -1.27
RXRBP28702 MIR4715-201ENST00000584117 79 ntBASIC7.11□□□□□ -1.27
RXRBP28702 AC005224.3-201ENST00000584683 2140 ntBASIC7.11□□□□□ -1.27
RXRBP28702 AC004009.2-201ENST00000623016 728 ntBASIC7.11□□□□□ -1.27
RXRBP28702 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC7.11□□□□□ -1.27
RXRBP28702 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC7.11□□□□□ -1.27
RXRBP28702 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC7.11□□□□□ -1.27
RXRBP28702 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RXRBP28702 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RXRBP28702 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RXRBP28702 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RXRBP28702 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RXRBP28702 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RXRBP28702 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RXRBP28702 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RXRBP28702 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC7.1□□□□□ -1.27
RXRBP28702 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC7.1□□□□□ -1.27
RXRBP28702 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
RXRBP28702 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RXRBP28702 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RXRBP28702 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
RXRBP28702 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC7.1□□□□□ -1.27
RXRBP28702 RPS4XP5-202ENST00000449995 1334 ntBASIC7.1□□□□□ -1.27
RXRBP28702 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC7.1□□□□□ -1.27
RXRBP28702 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
RXRBP28702 AL672167.1-206ENST00000356293 943 ntBASIC7.1□□□□□ -1.27
RXRBP28702 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RXRBP28702 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
RXRBP28702 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
RXRBP28702 RNU6-413P-201ENST00000384115 107 ntBASIC7.1□□□□□ -1.27
RXRBP28702 RNA5SP171-201ENST00000391071 115 ntBASIC7.1□□□□□ -1.27
RXRBP28702 FNDC3CP-201ENST00000420795 1155 ntBASIC7.1□□□□□ -1.27
RXRBP28702 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC7.1□□□□□ -1.27
RXRBP28702 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC7.1□□□□□ -1.27
RXRBP28702 AC104651.1-201ENST00000427559 735 ntBASIC7.1□□□□□ -1.27
RXRBP28702 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC7.1□□□□□ -1.27
RXRBP28702 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC7.1□□□□□ -1.27
RXRBP28702 AC007563.3-201ENST00000433233 371 ntBASIC7.1□□□□□ -1.27
RXRBP28702 UBE2V1P8-201ENST00000437166 265 ntBASIC7.1□□□□□ -1.27
RXRBP28702 GTF3AP5-201ENST00000442645 697 ntBASIC7.1□□□□□ -1.27
RXRBP28702 MTCYBP42-201ENST00000444653 1130 ntBASIC7.1□□□□□ -1.27
RXRBP28702 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC7.1□□□□□ -1.27
RXRBP28702 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC7.1□□□□□ -1.27
RXRBP28702 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC7.1□□□□□ -1.27
RXRBP28702 CYP4F27P-201ENST00000514557 494 ntBASIC7.1□□□□□ -1.27
RXRBP28702 RNA5SP464-201ENST00000516251 108 ntBASIC7.1□□□□□ -1.27
RXRBP28702 RN7SKP260-201ENST00000516907 149 ntBASIC7.1□□□□□ -1.27
RXRBP28702 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC7.1□□□□□ -1.27
RXRBP28702 AL049830.4-201ENST00000555149 351 ntBASIC7.1□□□□□ -1.27
RXRBP28702 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC7.1□□□□□ -1.27
RXRBP28702 AC106785.1-201ENST00000565935 262 ntBASIC7.1□□□□□ -1.27
RXRBP28702 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC7.1□□□□□ -1.27
RXRBP28702 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC7.1□□□□□ -1.27
RXRBP28702 AC128687.1-201ENST00000605304 619 ntBASIC7.1□□□□□ -1.27
RXRBP28702 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
RXRBP28702 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC7.1□□□□□ -1.27
RXRBP28702 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RXRBP28702 AC022034.1-201ENST00000512867 2156 ntBASIC7.1□□□□□ -1.27
RXRBP28702 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RXRBP28702 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
RXRBP28702 AC087359.1-201ENST00000508335 1740 ntBASIC7.1□□□□□ -1.27
RXRBP28702 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
RXRBP28702 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RXRBP28702 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
RXRBP28702 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC7.09□□□□□ -1.27
RXRBP28702 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
RXRBP28702 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
RXRBP28702 MTND4P16-201ENST00000466108 1367 ntBASIC7.09□□□□□ -1.27
RXRBP28702 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC7.09□□□□□ -1.27
RXRBP28702 AC139713.2-214ENST00000642059 1811 ntBASIC7.09□□□□□ -1.27
RXRBP28702 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC7.09□□□□□ -1.27
RXRBP28702 AL391994.1-201ENST00000254724 282 ntBASIC7.09□□□□□ -1.27
RXRBP28702 RNU4-21P-201ENST00000362802 126 ntBASIC7.09□□□□□ -1.27
RXRBP28702 Y_RNA.70-201ENST00000362886 110 ntBASIC7.09□□□□□ -1.27
RXRBP28702 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC7.09□□□□□ -1.27
RXRBP28702 MIR105-1-201ENST00000385222 81 ntBASIC7.09□□□□□ -1.27
RXRBP28702 AL589994.1-201ENST00000404962 340 ntBASIC7.09□□□□□ -1.27
RXRBP28702 RNU4-74P-201ENST00000411280 161 ntBASIC7.09□□□□□ -1.27
RXRBP28702 AC007161.1-204ENST00000423039 460 ntBASIC7.09□□□□□ -1.27
RXRBP28702 PNRC2P1-201ENST00000423940 420 ntBASIC7.09□□□□□ -1.27
RXRBP28702 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC7.09□□□□□ -1.27
RXRBP28702 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
RXRBP28702 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC7.09□□□□□ -1.27
RXRBP28702 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC7.09□□□□□ -1.27
RXRBP28702 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms