Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DPA1P20036 HMGB1P10-201ENST00000395823 563 ntBASIC4.71□□□□□ -1.66
HLA-DPA1P20036 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.71□□□□□ -1.66
HLA-DPA1P20036 Z98745.1-201ENST00000402553 494 ntBASIC4.71□□□□□ -1.66
HLA-DPA1P20036 AL353692.2-201ENST00000407054 335 ntBASIC4.71□□□□□ -1.66
HLA-DPA1P20036 RNU2-17P-201ENST00000410290 190 ntBASIC4.71□□□□□ -1.66
HLA-DPA1P20036 AC234782.4-201ENST00000417646 1048 ntBASIC4.71□□□□□ -1.66
HLA-DPA1P20036 AC140479.3-201ENST00000418944 1126 ntBASIC4.71□□□□□ -1.66
HLA-DPA1P20036 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.71□□□□□ -1.66
HLA-DPA1P20036 AL031736.2-201ENST00000426573 787 ntBASIC4.71□□□□□ -1.66
HLA-DPA1P20036 RPL34P6-201ENST00000432390 345 ntBASIC4.71□□□□□ -1.66
HLA-DPA1P20036 FTH1P16-201ENST00000435241 552 ntBASIC4.71□□□□□ -1.66
HLA-DPA1P20036 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.71□□□□□ -1.66
HLA-DPA1P20036 AC097499.1-201ENST00000444277 208 ntBASIC4.71□□□□□ -1.66
HLA-DPA1P20036 AL162388.1-201ENST00000450912 352 ntBASIC4.71□□□□□ -1.66
HLA-DPA1P20036 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DPA1P20036 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.71□□□□□ -1.66
HLA-DPA1P20036 HESX1-202ENST00000473921 757 ntTSL 5 BASIC4.71□□□□□ -1.66
HLA-DPA1P20036 AC011005.3-201ENST00000491624 395 ntBASIC4.71□□□□□ -1.66
HLA-DPA1P20036 RPL36AP41-201ENST00000493820 306 ntBASIC4.71□□□□□ -1.66
HLA-DPA1P20036 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DPA1P20036 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.71□□□□□ -1.66
HLA-DPA1P20036 OR7H2P-201ENST00000513483 306 ntBASIC4.71□□□□□ -1.66
HLA-DPA1P20036 RNU2-30P-201ENST00000516209 141 ntBASIC4.71□□□□□ -1.66
HLA-DPA1P20036 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.71□□□□□ -1.66
HLA-DPA1P20036 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DPA1P20036 OR4A2P-201ENST00000527276 913 ntBASIC4.71□□□□□ -1.66
HLA-DPA1P20036 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.71□□□□□ -1.66
HLA-DPA1P20036 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.71□□□□□ -1.66
HLA-DPA1P20036 AC025260.1-201ENST00000548858 430 ntBASIC4.71□□□□□ -1.66
HLA-DPA1P20036 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.71□□□□□ -1.66
HLA-DPA1P20036 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DPA1P20036 AC105129.1-201ENST00000560250 297 ntBASIC4.71□□□□□ -1.66
HLA-DPA1P20036 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.71□□□□□ -1.66
HLA-DPA1P20036 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.71□□□□□ -1.66
HLA-DPA1P20036 AC098935.2-201ENST00000604222 466 ntBASIC4.71□□□□□ -1.66
HLA-DPA1P20036 IMMP1LP1-201ENST00000605170 488 ntBASIC4.71□□□□□ -1.66
HLA-DPA1P20036 COX6CP4-201ENST00000605798 228 ntBASIC4.71□□□□□ -1.66
HLA-DPA1P20036 AC234782.5-201ENST00000617723 324 ntBASIC4.71□□□□□ -1.66
HLA-DPA1P20036 MIR6853-201ENST00000619642 74 ntBASIC4.71□□□□□ -1.66
HLA-DPA1P20036 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.71□□□□□ -1.66
HLA-DPA1P20036 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DPA1P20036 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DPA1P20036 AC087190.4-201ENST00000574616 8334 ntBASIC4.71□□□□□ -1.66
HLA-DPA1P20036 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HLA-DPA1P20036 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.71□□□□□ -1.66
HLA-DPA1P20036 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DPA1P20036 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.7□□□□□ -1.66
HLA-DPA1P20036 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
HLA-DPA1P20036 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
HLA-DPA1P20036 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.7□□□□□ -1.66
HLA-DPA1P20036 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DPA1P20036 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DPA1P20036 OR56B2P-201ENST00000317102 954 ntBASIC4.7□□□□□ -1.66
HLA-DPA1P20036 RNU6-1279P-201ENST00000383917 103 ntBASIC4.7□□□□□ -1.66
HLA-DPA1P20036 RNU6-98P-201ENST00000384173 107 ntBASIC4.7□□□□□ -1.66
HLA-DPA1P20036 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.7□□□□□ -1.66
HLA-DPA1P20036 RPL37P18-201ENST00000411602 243 ntBASIC4.7□□□□□ -1.66
HLA-DPA1P20036 TCEA1P4-201ENST00000415066 844 ntBASIC4.7□□□□□ -1.66
HLA-DPA1P20036 IPMKP1-201ENST00000425988 855 ntBASIC4.7□□□□□ -1.66
HLA-DPA1P20036 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.7□□□□□ -1.66
HLA-DPA1P20036 RPL7P29-201ENST00000437151 728 ntBASIC4.7□□□□□ -1.66
HLA-DPA1P20036 AC007000.2-201ENST00000442564 487 ntBASIC4.7□□□□□ -1.66
HLA-DPA1P20036 AC108463.1-201ENST00000450258 347 ntBASIC4.7□□□□□ -1.66
HLA-DPA1P20036 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.7□□□□□ -1.66
HLA-DPA1P20036 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC4.7□□□□□ -1.66
HLA-DPA1P20036 AL161747.1-201ENST00000480068 358 ntBASIC4.7□□□□□ -1.66
HLA-DPA1P20036 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DPA1P20036 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.7□□□□□ -1.66
HLA-DPA1P20036 FTH1P24-201ENST00000503502 462 ntBASIC4.7□□□□□ -1.66
HLA-DPA1P20036 AC098799.3-201ENST00000506095 438 ntBASIC4.7□□□□□ -1.66
HLA-DPA1P20036 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.7□□□□□ -1.66
HLA-DPA1P20036 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.7□□□□□ -1.66
HLA-DPA1P20036 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
HLA-DPA1P20036 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
HLA-DPA1P20036 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.7□□□□□ -1.66
HLA-DPA1P20036 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.7□□□□□ -1.66
HLA-DPA1P20036 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.7□□□□□ -1.66
HLA-DPA1P20036 AC015912.2-201ENST00000571053 181 ntBASIC4.7□□□□□ -1.66
HLA-DPA1P20036 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC4.7□□□□□ -1.66
HLA-DPA1P20036 AC005520.3-201ENST00000602874 370 ntBASIC4.7□□□□□ -1.66
HLA-DPA1P20036 AC119501.1-201ENST00000603646 475 ntBASIC4.7□□□□□ -1.66
HLA-DPA1P20036 AC018618.2-201ENST00000604770 446 ntBASIC4.7□□□□□ -1.66
HLA-DPA1P20036 AC004775.1-201ENST00000607389 753 ntBASIC4.7□□□□□ -1.66
HLA-DPA1P20036 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DPA1P20036 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.7□□□□□ -1.66
HLA-DPA1P20036 MIR6715B-201ENST00000637172 77 ntBASIC4.7□□□□□ -1.66
HLA-DPA1P20036 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.7□□□□□ -1.66
HLA-DPA1P20036 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
HLA-DPA1P20036 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HLA-DPA1P20036 AC120338.1-201ENST00000625074 1541 ntBASIC4.7□□□□□ -1.66
HLA-DPA1P20036 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.7□□□□□ -1.66
HLA-DPA1P20036 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.69□□□□□ -1.66
HLA-DPA1P20036 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DPA1P20036 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HLA-DPA1P20036 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
HLA-DPA1P20036 MIR921-201ENST00000401133 56 ntBASIC4.69□□□□□ -1.66
HLA-DPA1P20036 USP9YP9-201ENST00000429406 715 ntBASIC4.69□□□□□ -1.66
HLA-DPA1P20036 AC092447.2-201ENST00000435487 669 ntBASIC4.69□□□□□ -1.66
HLA-DPA1P20036 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms