Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC2.49□□□□□ -2.01
APOBP04114 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC2.49□□□□□ -2.01
APOBP04114 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC2.49□□□□□ -2.01
APOBP04114 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
APOBP04114 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
APOBP04114 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC2.49□□□□□ -2.01
APOBP04114 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
APOBP04114 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
APOBP04114 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
APOBP04114 RNA5SP374-201ENST00000362939 125 ntBASIC2.49□□□□□ -2.01
APOBP04114 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC2.49□□□□□ -2.01
APOBP04114 DDX39BP2-208ENST00000453923 258 ntBASIC2.49□□□□□ -2.01
APOBP04114 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC2.49□□□□□ -2.01
APOBP04114 AC106707.2-201ENST00000484182 374 ntBASIC2.49□□□□□ -2.01
APOBP04114 RNU7-143P-201ENST00000516781 65 ntBASIC2.49□□□□□ -2.01
APOBP04114 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC2.49□□□□□ -2.01
APOBP04114 HMGB2P1-201ENST00000591146 634 ntBASIC2.49□□□□□ -2.01
APOBP04114 AC015726.1-201ENST00000602353 681 ntBASIC2.49□□□□□ -2.01
APOBP04114 QTRT1P1-201ENST00000604344 1078 ntBASIC2.49□□□□□ -2.01
APOBP04114 AC016957.2-201ENST00000616998 848 ntBASIC2.49□□□□□ -2.01
APOBP04114 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
APOBP04114 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
APOBP04114 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC2.48□□□□□ -2.01
APOBP04114 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
APOBP04114 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC2.48□□□□□ -2.01
APOBP04114 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
APOBP04114 SNORA3.3-201ENST00000408712 125 ntBASIC2.48□□□□□ -2.01
APOBP04114 RPS7P15-201ENST00000415804 584 ntBASIC2.48□□□□□ -2.01
APOBP04114 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC2.48□□□□□ -2.01
APOBP04114 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC2.48□□□□□ -2.01
APOBP04114 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC2.48□□□□□ -2.01
APOBP04114 RPL21P23-201ENST00000446654 460 ntBASIC2.48□□□□□ -2.01
APOBP04114 AC090013.1-201ENST00000485147 480 ntBASIC2.48□□□□□ -2.01
APOBP04114 AC087369.1-201ENST00000520775 996 ntBASIC2.48□□□□□ -2.01
APOBP04114 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
APOBP04114 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.48□□□□□ -2.01
APOBP04114 MIR432-201ENST00000606207 94 ntBASIC2.48□□□□□ -2.01
APOBP04114 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC2.48□□□□□ -2.01
APOBP04114 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC2.48□□□□□ -2.01
APOBP04114 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
APOBP04114 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.48□□□□□ -2.01
APOBP04114 AL513548.1-201ENST00000562904 1724 ntBASIC2.48□□□□□ -2.01
APOBP04114 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC2.48□□□□□ -2.01
APOBP04114 AL133383.2-201ENST00000622958 2336 ntBASIC2.48□□□□□ -2.01
APOBP04114 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
APOBP04114 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC2.48□□□□□ -2.01
APOBP04114 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
APOBP04114 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
APOBP04114 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
APOBP04114 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC2.48□□□□□ -2.01
APOBP04114 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
APOBP04114 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
APOBP04114 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC2.48□□□□□ -2.01
APOBP04114 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC2.48□□□□□ -2.01
APOBP04114 RN7SKP141-201ENST00000516167 338 ntBASIC2.48□□□□□ -2.01
APOBP04114 TRAPPC2P2-201ENST00000517589 409 ntBASIC2.48□□□□□ -2.01
APOBP04114 AC027176.2-201ENST00000559166 746 ntBASIC2.48□□□□□ -2.01
APOBP04114 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC2.48□□□□□ -2.01
APOBP04114 AC020914.6-201ENST00000594327 272 ntBASIC2.48□□□□□ -2.01
APOBP04114 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC2.48□□□□□ -2.01
APOBP04114 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
APOBP04114 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
APOBP04114 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC2.48□□□□□ -2.01
APOBP04114 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
APOBP04114 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
APOBP04114 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC2.48□□□□□ -2.01
APOBP04114 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.48□□□□□ -2.01
APOBP04114 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
APOBP04114 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC2.48□□□□□ -2.01
APOBP04114 RNU11-201ENST00000387069 134 ntBASIC2.48□□□□□ -2.01
APOBP04114 AC093719.1-202ENST00000392735 373 ntBASIC2.48□□□□□ -2.01
APOBP04114 AL603766.1-201ENST00000407763 664 ntBASIC2.48□□□□□ -2.01
APOBP04114 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.48□□□□□ -2.01
APOBP04114 AL590609.2-201ENST00000421430 368 ntBASIC2.48□□□□□ -2.01
APOBP04114 EIF1P3-201ENST00000423841 334 ntBASIC2.48□□□□□ -2.01
APOBP04114 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC2.48□□□□□ -2.01
APOBP04114 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC2.48□□□□□ -2.01
APOBP04114 PPP1R11P1-201ENST00000486095 376 ntBASIC2.48□□□□□ -2.01
APOBP04114 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC2.48□□□□□ -2.01
APOBP04114 AL360012.1-201ENST00000602813 131 ntBASIC2.48□□□□□ -2.01
APOBP04114 AL137849.1-201ENST00000604767 169 ntBASIC2.48□□□□□ -2.01
APOBP04114 AP005264.7-201ENST00000625003 745 ntBASIC2.48□□□□□ -2.01
APOBP04114 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
APOBP04114 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
APOBP04114 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC2.48□□□□□ -2.01
APOBP04114 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
APOBP04114 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC2.48□□□□□ -2.01
APOBP04114 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC2.48□□□□□ -2.01
APOBP04114 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC2.47□□□□□ -2.01
APOBP04114 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC2.47□□□□□ -2.01
APOBP04114 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC2.47□□□□□ -2.01
APOBP04114 AL512649.1-201ENST00000428997 581 ntBASIC2.47□□□□□ -2.01
APOBP04114 RPL12P46-201ENST00000436610 195 ntBASIC2.47□□□□□ -2.01
APOBP04114 RPL5P12-201ENST00000477071 851 ntBASIC2.47□□□□□ -2.01
APOBP04114 AC084759.1-201ENST00000561168 290 ntBASIC2.47□□□□□ -2.01
APOBP04114 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
APOBP04114 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
APOBP04114 AL033543.1-201ENST00000623440 13454 ntBASIC2.47□□□□□ -2.01
APOBP04114 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
APOBP04114 Z82217.1-201ENST00000625157 8149 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms