Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AP000936.3-201ENST00000438127 255 ntBASIC6.33□□□□□ -1.4
PDGFAP04085 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC6.33□□□□□ -1.4
PDGFAP04085 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC6.33□□□□□ -1.4
PDGFAP04085 AC007383.1-201ENST00000445875 636 ntBASIC6.33□□□□□ -1.4
PDGFAP04085 MTND1P18-201ENST00000448191 573 ntBASIC6.33□□□□□ -1.4
PDGFAP04085 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC6.33□□□□□ -1.4
PDGFAP04085 RPS20P32-201ENST00000456044 356 ntBASIC6.33□□□□□ -1.4
PDGFAP04085 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.33□□□□□ -1.4
PDGFAP04085 RNU6-261P-201ENST00000459506 102 ntBASIC6.33□□□□□ -1.4
PDGFAP04085 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC6.33□□□□□ -1.4
PDGFAP04085 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC6.33□□□□□ -1.4
PDGFAP04085 AC093664.1-201ENST00000511779 289 ntBASIC6.33□□□□□ -1.4
PDGFAP04085 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC6.33□□□□□ -1.4
PDGFAP04085 AC022861.1-201ENST00000522981 663 ntBASIC6.33□□□□□ -1.4
PDGFAP04085 AC022690.1-201ENST00000526681 550 ntBASIC6.33□□□□□ -1.4
PDGFAP04085 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC6.33□□□□□ -1.4
PDGFAP04085 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PDGFAP04085 AC243972.3-201ENST00000539655 198 ntBASIC6.33□□□□□ -1.4
PDGFAP04085 AC007068.2-201ENST00000543168 395 ntBASIC6.33□□□□□ -1.4
PDGFAP04085 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC6.33□□□□□ -1.4
PDGFAP04085 LSM6P2-201ENST00000552208 177 ntBASIC6.33□□□□□ -1.4
PDGFAP04085 AL162632.2-201ENST00000553933 399 ntBASIC6.33□□□□□ -1.4
PDGFAP04085 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
PDGFAP04085 AC090515.3-201ENST00000560431 315 ntBASIC6.33□□□□□ -1.4
PDGFAP04085 LARP7P2-201ENST00000575306 125 ntBASIC6.33□□□□□ -1.4
PDGFAP04085 MIR4301-201ENST00000577203 66 ntBASIC6.33□□□□□ -1.4
PDGFAP04085 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC6.33□□□□□ -1.4
PDGFAP04085 AC063977.7-201ENST00000594454 337 ntBASIC6.33□□□□□ -1.4
PDGFAP04085 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC6.33□□□□□ -1.4
PDGFAP04085 AL445222.1-201ENST00000607259 628 ntBASIC6.33□□□□□ -1.4
PDGFAP04085 AL050343.2-201ENST00000607338 280 ntBASIC6.33□□□□□ -1.4
PDGFAP04085 AL355816.1-201ENST00000607951 118 ntBASIC6.33□□□□□ -1.4
PDGFAP04085 AL132765.2-201ENST00000610812 351 ntBASIC6.33□□□□□ -1.4
PDGFAP04085 DISC2.1-201ENST00000612827 205 ntBASIC6.33□□□□□ -1.4
PDGFAP04085 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC6.33□□□□□ -1.4
PDGFAP04085 AC090527.3-201ENST00000619041 548 ntBASIC6.33□□□□□ -1.4
PDGFAP04085 AC024940.5-201ENST00000622889 474 ntBASIC6.33□□□□□ -1.4
PDGFAP04085 AC009161.2-201ENST00000624626 138 ntBASIC6.33□□□□□ -1.4
PDGFAP04085 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.33□□□□□ -1.4
PDGFAP04085 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.33□□□□□ -1.4
PDGFAP04085 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
PDGFAP04085 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC6.33□□□□□ -1.4
PDGFAP04085 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PDGFAP04085 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC6.33□□□□□ -1.4
PDGFAP04085 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PDGFAP04085 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PDGFAP04085 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
PDGFAP04085 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PDGFAP04085 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PDGFAP04085 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
PDGFAP04085 DLEU2L-201ENST00000371086 3555 ntBASIC6.33□□□□□ -1.4
PDGFAP04085 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC6.33□□□□□ -1.4
PDGFAP04085 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PDGFAP04085 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.4
PDGFAP04085 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PDGFAP04085 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PDGFAP04085 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PDGFAP04085 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
PDGFAP04085 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PDGFAP04085 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.32□□□□□ -1.4
PDGFAP04085 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
PDGFAP04085 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC6.32□□□□□ -1.4
PDGFAP04085 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
PDGFAP04085 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
PDGFAP04085 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PDGFAP04085 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PDGFAP04085 MFSD4BP1-201ENST00000513330 1552 ntBASIC6.32□□□□□ -1.4
PDGFAP04085 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
PDGFAP04085 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
PDGFAP04085 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
PDGFAP04085 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC6.32□□□□□ -1.4
PDGFAP04085 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PDGFAP04085 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.32□□□□□ -1.4
PDGFAP04085 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PDGFAP04085 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.32□□□□□ -1.4
PDGFAP04085 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PDGFAP04085 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PDGFAP04085 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC6.32□□□□□ -1.4
PDGFAP04085 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PDGFAP04085 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PDGFAP04085 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PDGFAP04085 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PDGFAP04085 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
PDGFAP04085 OR5J1P-201ENST00000313544 939 ntBASIC6.32□□□□□ -1.4
PDGFAP04085 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PDGFAP04085 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PDGFAP04085 RNU5E-1-201ENST00000362477 120 ntBASIC6.32□□□□□ -1.4
PDGFAP04085 RNU6-1120P-201ENST00000362988 108 ntBASIC6.32□□□□□ -1.4
PDGFAP04085 RNU1-55P-201ENST00000365510 158 ntBASIC6.32□□□□□ -1.4
PDGFAP04085 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PDGFAP04085 MIR649-201ENST00000384843 97 ntBASIC6.32□□□□□ -1.4
PDGFAP04085 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
PDGFAP04085 AL023807.1-201ENST00000407932 359 ntBASIC6.32□□□□□ -1.4
PDGFAP04085 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PDGFAP04085 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.32□□□□□ -1.4
PDGFAP04085 SLC35E1P1-201ENST00000419313 864 ntBASIC6.32□□□□□ -1.4
PDGFAP04085 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC6.32□□□□□ -1.4
PDGFAP04085 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC6.32□□□□□ -1.4
PDGFAP04085 AC005534.2-201ENST00000431047 433 ntBASIC6.32□□□□□ -1.4
PDGFAP04085 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms