Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 AC004825.2-201ENST00000616634 455 ntBASIC4.21□□□□□ -1.74
SEMA3DO95025 MIR6730-201ENST00000622213 67 ntBASIC4.21□□□□□ -1.74
SEMA3DO95025 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
SEMA3DO95025 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
SEMA3DO95025 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
SEMA3DO95025 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.21□□□□□ -1.74
SEMA3DO95025 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SEMA3DO95025 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
SEMA3DO95025 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
SEMA3DO95025 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
SEMA3DO95025 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
SEMA3DO95025 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SEMA3DO95025 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SEMA3DO95025 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
SEMA3DO95025 MT-RNR1-201ENST00000389680 954 ntBASIC4.2□□□□□ -1.74
SEMA3DO95025 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SEMA3DO95025 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SEMA3DO95025 RPS16P5-201ENST00000406501 404 ntBASIC4.2□□□□□ -1.74
SEMA3DO95025 RNA5SP104-201ENST00000410989 118 ntBASIC4.2□□□□□ -1.74
SEMA3DO95025 AC098592.2-201ENST00000413158 265 ntBASIC4.2□□□□□ -1.74
SEMA3DO95025 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.2□□□□□ -1.74
SEMA3DO95025 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.2□□□□□ -1.74
SEMA3DO95025 RPL7AP25-201ENST00000423357 805 ntBASIC4.2□□□□□ -1.74
SEMA3DO95025 AC022022.1-201ENST00000430304 178 ntBASIC4.2□□□□□ -1.74
SEMA3DO95025 LYPLA1P1-201ENST00000434514 622 ntBASIC4.2□□□□□ -1.74
SEMA3DO95025 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC4.2□□□□□ -1.74
SEMA3DO95025 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.2□□□□□ -1.74
SEMA3DO95025 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.2□□□□□ -1.74
SEMA3DO95025 EIF2S2P4-201ENST00000461070 984 ntBASIC4.2□□□□□ -1.74
SEMA3DO95025 OR52A4P-201ENST00000472867 958 ntBASIC4.2□□□□□ -1.74
SEMA3DO95025 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.2□□□□□ -1.74
SEMA3DO95025 PPBPP1-201ENST00000510807 373 ntBASIC4.2□□□□□ -1.74
SEMA3DO95025 AC015795.1-201ENST00000513669 327 ntBASIC4.2□□□□□ -1.74
SEMA3DO95025 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.2□□□□□ -1.74
SEMA3DO95025 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.2□□□□□ -1.74
SEMA3DO95025 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.2□□□□□ -1.74
SEMA3DO95025 AC068790.5-201ENST00000602741 355 ntBASIC4.2□□□□□ -1.74
SEMA3DO95025 AC012409.3-201ENST00000611343 981 ntBASIC4.2□□□□□ -1.74
SEMA3DO95025 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SEMA3DO95025 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SEMA3DO95025 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.2□□□□□ -1.74
SEMA3DO95025 RAD17P1-201ENST00000418130 2042 ntBASIC4.2□□□□□ -1.74
SEMA3DO95025 IQCB2P-201ENST00000401788 1633 ntBASIC4.2□□□□□ -1.74
SEMA3DO95025 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SEMA3DO95025 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SEMA3DO95025 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SEMA3DO95025 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SEMA3DO95025 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SEMA3DO95025 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.19□□□□□ -1.74
SEMA3DO95025 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.19□□□□□ -1.74
SEMA3DO95025 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
SEMA3DO95025 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
SEMA3DO95025 AC008725.1-201ENST00000605123 2263 ntBASIC4.19□□□□□ -1.74
SEMA3DO95025 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SEMA3DO95025 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
SEMA3DO95025 MIR513A2-201ENST00000385249 127 ntBASIC4.19□□□□□ -1.74
SEMA3DO95025 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SEMA3DO95025 RNU6-603P-201ENST00000411403 107 ntBASIC4.19□□□□□ -1.74
SEMA3DO95025 AC119751.6-201ENST00000416712 186 ntBASIC4.19□□□□□ -1.74
SEMA3DO95025 AC073335.1-201ENST00000427776 363 ntBASIC4.19□□□□□ -1.74
SEMA3DO95025 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.19□□□□□ -1.74
SEMA3DO95025 AL138878.2-201ENST00000440581 1241 ntBASIC4.19□□□□□ -1.74
SEMA3DO95025 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.19□□□□□ -1.74
SEMA3DO95025 ARL2BPP10-201ENST00000446487 531 ntBASIC4.19□□□□□ -1.74
SEMA3DO95025 DHFRP3-201ENST00000455595 559 ntBASIC4.19□□□□□ -1.74
SEMA3DO95025 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.19□□□□□ -1.74
SEMA3DO95025 AC025445.1-201ENST00000502728 300 ntBASIC4.19□□□□□ -1.74
SEMA3DO95025 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.19□□□□□ -1.74
SEMA3DO95025 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.19□□□□□ -1.74
SEMA3DO95025 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
SEMA3DO95025 SNORD116-30-201ENST00000516468 85 ntBASIC4.19□□□□□ -1.74
SEMA3DO95025 RNU4-18P-201ENST00000516751 149 ntBASIC4.19□□□□□ -1.74
SEMA3DO95025 IGLVIV-53-201ENST00000520107 367 ntBASIC4.19□□□□□ -1.74
SEMA3DO95025 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.19□□□□□ -1.74
SEMA3DO95025 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.19□□□□□ -1.74
SEMA3DO95025 AC084757.1-201ENST00000559987 490 ntBASIC4.19□□□□□ -1.74
SEMA3DO95025 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.19□□□□□ -1.74
SEMA3DO95025 OR1AB1P-201ENST00000585564 761 ntBASIC4.19□□□□□ -1.74
SEMA3DO95025 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.19□□□□□ -1.74
SEMA3DO95025 AC010615.3-201ENST00000597319 394 ntBASIC4.19□□□□□ -1.74
SEMA3DO95025 AC005034.4-201ENST00000603612 899 ntBASIC4.19□□□□□ -1.74
SEMA3DO95025 AP005212.4-201ENST00000614206 710 ntBASIC4.19□□□□□ -1.74
SEMA3DO95025 AL645927.2-201ENST00000618350 349 ntBASIC4.19□□□□□ -1.74
SEMA3DO95025 AC074276.2-201ENST00000619891 348 ntBASIC4.19□□□□□ -1.74
SEMA3DO95025 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.19□□□□□ -1.74
SEMA3DO95025 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.19□□□□□ -1.74
SEMA3DO95025 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.19□□□□□ -1.74
SEMA3DO95025 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.19□□□□□ -1.74
SEMA3DO95025 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
SEMA3DO95025 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SEMA3DO95025 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.19□□□□□ -1.74
SEMA3DO95025 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SEMA3DO95025 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SEMA3DO95025 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SEMA3DO95025 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SEMA3DO95025 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.18□□□□□ -1.74
SEMA3DO95025 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.18□□□□□ -1.74
SEMA3DO95025 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.18□□□□□ -1.74
SEMA3DO95025 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SEMA3DO95025 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms