Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SSSCA1O60232 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SSSCA1O60232 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.3□□□□□ -1.88
SSSCA1O60232 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.3□□□□□ -1.88
SSSCA1O60232 CD24P2-201ENST00000565486 219 ntBASIC3.3□□□□□ -1.88
SSSCA1O60232 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SSSCA1O60232 AC012417.1-201ENST00000582307 1039 ntBASIC3.3□□□□□ -1.88
SSSCA1O60232 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.3□□□□□ -1.88
SSSCA1O60232 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC3.3□□□□□ -1.88
SSSCA1O60232 AC008782.1-201ENST00000603386 430 ntBASIC3.3□□□□□ -1.88
SSSCA1O60232 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.3□□□□□ -1.88
SSSCA1O60232 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.3□□□□□ -1.88
SSSCA1O60232 AC004825.2-201ENST00000616634 455 ntBASIC3.3□□□□□ -1.88
SSSCA1O60232 MIR6826-201ENST00000617808 98 ntBASIC3.3□□□□□ -1.88
SSSCA1O60232 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC3.3□□□□□ -1.88
SSSCA1O60232 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SSSCA1O60232 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SSSCA1O60232 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SSSCA1O60232 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
SSSCA1O60232 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
SSSCA1O60232 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SSSCA1O60232 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
SSSCA1O60232 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SSSCA1O60232 UBE3AP2-201ENST00000429033 2259 ntBASIC3.3□□□□□ -1.88
SSSCA1O60232 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.29□□□□□ -1.88
SSSCA1O60232 LINC00561-201ENST00000565815 2738 ntBASIC3.29□□□□□ -1.88
SSSCA1O60232 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SSSCA1O60232 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.29□□□□□ -1.88
SSSCA1O60232 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC3.29□□□□□ -1.88
SSSCA1O60232 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.29□□□□□ -1.88
SSSCA1O60232 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC3.29□□□□□ -1.88
SSSCA1O60232 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
SSSCA1O60232 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.29□□□□□ -1.88
SSSCA1O60232 HMGN2P8-201ENST00000391458 268 ntBASIC3.29□□□□□ -1.88
SSSCA1O60232 RN7SKP235-201ENST00000410662 305 ntBASIC3.29□□□□□ -1.88
SSSCA1O60232 RANP7-201ENST00000418085 644 ntBASIC3.29□□□□□ -1.88
SSSCA1O60232 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC3.29□□□□□ -1.88
SSSCA1O60232 PSMD10P3-201ENST00000437000 448 ntBASIC3.29□□□□□ -1.88
SSSCA1O60232 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.29□□□□□ -1.88
SSSCA1O60232 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC3.29□□□□□ -1.88
SSSCA1O60232 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC3.29□□□□□ -1.88
SSSCA1O60232 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC3.29□□□□□ -1.88
SSSCA1O60232 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.29□□□□□ -1.88
SSSCA1O60232 PHBP16-201ENST00000446318 950 ntBASIC3.29□□□□□ -1.88
SSSCA1O60232 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC3.29□□□□□ -1.88
SSSCA1O60232 RPL10P17-201ENST00000453852 316 ntBASIC3.29□□□□□ -1.88
SSSCA1O60232 AC018638.3-201ENST00000461273 132 ntBASIC3.29□□□□□ -1.88
SSSCA1O60232 AC010307.1-201ENST00000467206 836 ntBASIC3.29□□□□□ -1.88
SSSCA1O60232 AC109327.1-201ENST00000471666 403 ntBASIC3.29□□□□□ -1.88
SSSCA1O60232 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC3.29□□□□□ -1.88
SSSCA1O60232 AC098583.1-201ENST00000480875 255 ntBASIC3.29□□□□□ -1.88
SSSCA1O60232 AC093763.2-201ENST00000505334 1223 ntBASIC3.29□□□□□ -1.88
SSSCA1O60232 AC004069.2-201ENST00000505438 1114 ntBASIC3.29□□□□□ -1.88
SSSCA1O60232 OR7H2P-201ENST00000513483 306 ntBASIC3.29□□□□□ -1.88
SSSCA1O60232 RFPL4AP3-201ENST00000515267 345 ntBASIC3.29□□□□□ -1.88
SSSCA1O60232 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.29□□□□□ -1.88
SSSCA1O60232 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SSSCA1O60232 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC3.29□□□□□ -1.88
SSSCA1O60232 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SSSCA1O60232 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SSSCA1O60232 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC3.29□□□□□ -1.88
SSSCA1O60232 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.29□□□□□ -1.88
SSSCA1O60232 AC022655.2-201ENST00000577280 318 ntBASIC3.29□□□□□ -1.88
SSSCA1O60232 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.29□□□□□ -1.88
SSSCA1O60232 AL445222.1-201ENST00000607259 628 ntBASIC3.29□□□□□ -1.88
SSSCA1O60232 AC012409.3-201ENST00000611343 981 ntBASIC3.29□□□□□ -1.88
SSSCA1O60232 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SSSCA1O60232 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC3.29□□□□□ -1.88
SSSCA1O60232 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.29□□□□□ -1.88
SSSCA1O60232 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SSSCA1O60232 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
SSSCA1O60232 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SSSCA1O60232 AC245100.2-201ENST00000454544 1679 ntBASIC3.29□□□□□ -1.88
SSSCA1O60232 AC134882.1-201ENST00000603738 1676 ntBASIC3.29□□□□□ -1.88
SSSCA1O60232 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SSSCA1O60232 RAD17P1-201ENST00000418130 2042 ntBASIC3.29□□□□□ -1.88
SSSCA1O60232 AC093311.1-201ENST00000506586 2021 ntBASIC3.29□□□□□ -1.88
SSSCA1O60232 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.28□□□□□ -1.88
SSSCA1O60232 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
SSSCA1O60232 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SSSCA1O60232 AC090971.4-201ENST00000560291 1800 ntBASIC3.28□□□□□ -1.88
SSSCA1O60232 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
SSSCA1O60232 AC090017.1-201ENST00000548612 1779 ntBASIC3.28□□□□□ -1.88
SSSCA1O60232 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.28□□□□□ -1.88
SSSCA1O60232 NAMPTP1-201ENST00000440465 2514 ntBASIC3.28□□□□□ -1.88
SSSCA1O60232 USP9YP4-201ENST00000424401 1745 ntBASIC3.28□□□□□ -1.88
SSSCA1O60232 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.28□□□□□ -1.88
SSSCA1O60232 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.28□□□□□ -1.88
SSSCA1O60232 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.28□□□□□ -1.88
SSSCA1O60232 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.28□□□□□ -1.88
SSSCA1O60232 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC3.28□□□□□ -1.88
SSSCA1O60232 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SSSCA1O60232 RNU1-14P-201ENST00000362759 152 ntBASIC3.28□□□□□ -1.88
SSSCA1O60232 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SSSCA1O60232 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SSSCA1O60232 RNU6-1320P-201ENST00000390838 107 ntBASIC3.28□□□□□ -1.88
SSSCA1O60232 RNU6-1269P-201ENST00000391139 107 ntBASIC3.28□□□□□ -1.88
SSSCA1O60232 CCL7-202ENST00000394627 696 ntTSL 3 BASIC3.28□□□□□ -1.88
SSSCA1O60232 AMD1P2-201ENST00000412936 992 ntBASIC3.28□□□□□ -1.88
SSSCA1O60232 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms