Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC5.59□□□□□ -1.51
SHISA3A0PJX4 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC5.59□□□□□ -1.51
SHISA3A0PJX4 AL732618.1-201ENST00000623251 301 ntBASIC5.59□□□□□ -1.51
SHISA3A0PJX4 AC019278.1-201ENST00000623516 479 ntBASIC5.59□□□□□ -1.51
SHISA3A0PJX4 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
SHISA3A0PJX4 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
SHISA3A0PJX4 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
SHISA3A0PJX4 ZNF33BP1-201ENST00000452497 1834 ntBASIC5.59□□□□□ -1.51
SHISA3A0PJX4 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SHISA3A0PJX4 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SHISA3A0PJX4 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
SHISA3A0PJX4 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SHISA3A0PJX4 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
SHISA3A0PJX4 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SHISA3A0PJX4 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SHISA3A0PJX4 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.59□□□□□ -1.52
SHISA3A0PJX4 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
SHISA3A0PJX4 AC074141.1-201ENST00000588129 2995 ntBASIC5.58□□□□□ -1.52
SHISA3A0PJX4 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 AC024560.2-201ENST00000507981 1497 ntBASIC5.58□□□□□ -1.52
SHISA3A0PJX4 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 RNU4-79P-201ENST00000362764 141 ntBASIC5.58□□□□□ -1.52
SHISA3A0PJX4 RNU6-289P-201ENST00000364093 107 ntBASIC5.58□□□□□ -1.52
SHISA3A0PJX4 RN7SKP257-201ENST00000364525 309 ntBASIC5.58□□□□□ -1.52
SHISA3A0PJX4 RNA5SP478-201ENST00000364657 115 ntBASIC5.58□□□□□ -1.52
SHISA3A0PJX4 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 RNA5SP176-201ENST00000390956 110 ntBASIC5.58□□□□□ -1.52
SHISA3A0PJX4 RN7SKP30-201ENST00000411373 334 ntBASIC5.58□□□□□ -1.52
SHISA3A0PJX4 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 AC007394.1-201ENST00000421941 531 ntBASIC5.58□□□□□ -1.52
SHISA3A0PJX4 OR51AB1P-201ENST00000429046 620 ntBASIC5.58□□□□□ -1.52
SHISA3A0PJX4 AC005534.2-201ENST00000431047 433 ntBASIC5.58□□□□□ -1.52
SHISA3A0PJX4 RPS26P40-201ENST00000435209 294 ntBASIC5.58□□□□□ -1.52
SHISA3A0PJX4 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 RPL7P54-201ENST00000438336 674 ntBASIC5.58□□□□□ -1.52
SHISA3A0PJX4 AC239800.1-201ENST00000442049 719 ntBASIC5.58□□□□□ -1.52
SHISA3A0PJX4 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 RPS15AP17-201ENST00000470598 390 ntBASIC5.58□□□□□ -1.52
SHISA3A0PJX4 RN7SL390P-201ENST00000470634 284 ntBASIC5.58□□□□□ -1.52
SHISA3A0PJX4 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 NIFKP7-201ENST00000503365 834 ntBASIC5.58□□□□□ -1.52
SHISA3A0PJX4 AC106760.2-201ENST00000504159 619 ntBASIC5.58□□□□□ -1.52
SHISA3A0PJX4 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 SCARNA5-201ENST00000516201 276 ntBASIC5.58□□□□□ -1.52
SHISA3A0PJX4 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 BRD9P1-201ENST00000529855 560 ntBASIC5.58□□□□□ -1.52
SHISA3A0PJX4 NDUFA3P2-201ENST00000531434 232 ntBASIC5.58□□□□□ -1.52
SHISA3A0PJX4 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 AC007068.2-201ENST00000543168 395 ntBASIC5.58□□□□□ -1.52
SHISA3A0PJX4 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 AC024614.1-201ENST00000577546 307 ntBASIC5.58□□□□□ -1.52
SHISA3A0PJX4 AP001836.1-201ENST00000604675 523 ntBASIC5.58□□□□□ -1.52
SHISA3A0PJX4 AL136363.1-201ENST00000605349 337 ntBASIC5.58□□□□□ -1.52
SHISA3A0PJX4 AC055876.5-201ENST00000605667 259 ntBASIC5.58□□□□□ -1.52
SHISA3A0PJX4 AL050343.2-201ENST00000607338 280 ntBASIC5.58□□□□□ -1.52
SHISA3A0PJX4 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 AL008723.3-201ENST00000608926 449 ntBASIC5.58□□□□□ -1.52
SHISA3A0PJX4 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 AL161931.1-201ENST00000612768 246 ntBASIC5.58□□□□□ -1.52
SHISA3A0PJX4 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 YWHAEP7-203ENST00000622054 312 ntBASIC5.58□□□□□ -1.52
SHISA3A0PJX4 AL158801.5-201ENST00000623123 465 ntBASIC5.58□□□□□ -1.52
SHISA3A0PJX4 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 SAGE3P-201ENST00000619800 1635 ntBASIC5.58□□□□□ -1.52
SHISA3A0PJX4 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.58□□□□□ -1.52
SHISA3A0PJX4 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms