Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AC079610.2-201ENST00000604818 690 ntBASIC4.71□□□□□ -1.66
PCDHGA1Q9Y5H4 AL450270.1-201ENST00000606160 391 ntBASIC4.71□□□□□ -1.66
PCDHGA1Q9Y5H4 FAM27B-201ENST00000610601 213 ntBASIC4.71□□□□□ -1.66
PCDHGA1Q9Y5H4 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PCDHGA1Q9Y5H4 MLECP1-201ENST00000615893 709 ntBASIC4.71□□□□□ -1.66
PCDHGA1Q9Y5H4 OR56B2P-202ENST00000641377 2453 ntBASIC4.71□□□□□ -1.66
PCDHGA1Q9Y5H4 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
PCDHGA1Q9Y5H4 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PCDHGA1Q9Y5H4 VN2R3P-201ENST00000422626 1412 ntBASIC4.71□□□□□ -1.66
PCDHGA1Q9Y5H4 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
PCDHGA1Q9Y5H4 AC074029.4-201ENST00000624796 1859 ntBASIC4.71□□□□□ -1.66
PCDHGA1Q9Y5H4 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.71□□□□□ -1.66
PCDHGA1Q9Y5H4 AC025574.1-201ENST00000554784 1653 ntBASIC4.7□□□□□ -1.66
PCDHGA1Q9Y5H4 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
PCDHGA1Q9Y5H4 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
PCDHGA1Q9Y5H4 METTL21EP-201ENST00000298105 713 ntBASIC4.7□□□□□ -1.66
PCDHGA1Q9Y5H4 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.7□□□□□ -1.66
PCDHGA1Q9Y5H4 U3.22-201ENST00000391120 215 ntBASIC4.7□□□□□ -1.66
PCDHGA1Q9Y5H4 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
PCDHGA1Q9Y5H4 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.7□□□□□ -1.66
PCDHGA1Q9Y5H4 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.7□□□□□ -1.66
PCDHGA1Q9Y5H4 AC012519.1-201ENST00000424588 610 ntBASIC4.7□□□□□ -1.66
PCDHGA1Q9Y5H4 RPL19P16-201ENST00000433839 588 ntBASIC4.7□□□□□ -1.66
PCDHGA1Q9Y5H4 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.7□□□□□ -1.66
PCDHGA1Q9Y5H4 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.7□□□□□ -1.66
PCDHGA1Q9Y5H4 AC090804.1-201ENST00000448870 490 ntBASIC4.7□□□□□ -1.66
PCDHGA1Q9Y5H4 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.7□□□□□ -1.66
PCDHGA1Q9Y5H4 MTND2P28-201ENST00000457540 1044 ntBASIC4.7□□□□□ -1.66
PCDHGA1Q9Y5H4 AC006511.1-201ENST00000470614 315 ntBASIC4.7□□□□□ -1.66
PCDHGA1Q9Y5H4 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.7□□□□□ -1.66
PCDHGA1Q9Y5H4 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.7□□□□□ -1.66
PCDHGA1Q9Y5H4 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.7□□□□□ -1.66
PCDHGA1Q9Y5H4 AC093840.1-201ENST00000511599 336 ntBASIC4.7□□□□□ -1.66
PCDHGA1Q9Y5H4 AC004923.2-201ENST00000529649 369 ntBASIC4.7□□□□□ -1.66
PCDHGA1Q9Y5H4 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.7□□□□□ -1.66
PCDHGA1Q9Y5H4 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.7□□□□□ -1.66
PCDHGA1Q9Y5H4 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.7□□□□□ -1.66
PCDHGA1Q9Y5H4 HNRNPCP4-201ENST00000571636 900 ntBASIC4.7□□□□□ -1.66
PCDHGA1Q9Y5H4 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.7□□□□□ -1.66
PCDHGA1Q9Y5H4 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.7□□□□□ -1.66
PCDHGA1Q9Y5H4 AC022726.1-201ENST00000587475 207 ntBASIC4.7□□□□□ -1.66
PCDHGA1Q9Y5H4 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.7□□□□□ -1.66
PCDHGA1Q9Y5H4 AC103792.1-201ENST00000603591 919 ntBASIC4.7□□□□□ -1.66
PCDHGA1Q9Y5H4 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.7□□□□□ -1.66
PCDHGA1Q9Y5H4 AC004775.1-201ENST00000607389 753 ntBASIC4.7□□□□□ -1.66
PCDHGA1Q9Y5H4 AC005962.2-201ENST00000611427 652 ntBASIC4.7□□□□□ -1.66
PCDHGA1Q9Y5H4 MIR6716-201ENST00000613413 80 ntBASIC4.7□□□□□ -1.66
PCDHGA1Q9Y5H4 AL049794.2-201ENST00000616301 365 ntBASIC4.7□□□□□ -1.66
PCDHGA1Q9Y5H4 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.7□□□□□ -1.66
PCDHGA1Q9Y5H4 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.7□□□□□ -1.66
PCDHGA1Q9Y5H4 AC116563.2-201ENST00000624751 535 ntBASIC4.7□□□□□ -1.66
PCDHGA1Q9Y5H4 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PCDHGA1Q9Y5H4 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.7□□□□□ -1.66
PCDHGA1Q9Y5H4 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
PCDHGA1Q9Y5H4 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
PCDHGA1Q9Y5H4 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
PCDHGA1Q9Y5H4 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
PCDHGA1Q9Y5H4 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PCDHGA1Q9Y5H4 AC108751.5-201ENST00000492880 1336 ntBASIC4.7□□□□□ -1.66
PCDHGA1Q9Y5H4 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.7□□□□□ -1.66
PCDHGA1Q9Y5H4 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.7□□□□□ -1.66
PCDHGA1Q9Y5H4 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.7□□□□□ -1.66
PCDHGA1Q9Y5H4 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 AC092162.3-201ENST00000624511 1624 ntBASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 AC120338.1-201ENST00000625074 1541 ntBASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 RNU6-984P-201ENST00000363236 109 ntBASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 RNA5SP447-201ENST00000363749 119 ntBASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 OR1L6-202ENST00000373684 1044 ntBASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 U3.30-201ENST00000391308 210 ntBASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 AL353692.2-201ENST00000407054 335 ntBASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 RPL31P52-201ENST00000407532 367 ntBASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 RNU4-25P-201ENST00000410569 230 ntBASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 RN7SKP97-201ENST00000410966 333 ntBASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 OR2B7P-201ENST00000429302 934 ntBASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 AL590762.3-201ENST00000436372 640 ntBASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 AC074367.1-201ENST00000438685 1125 ntBASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 AC013356.1-201ENST00000489027 564 ntBASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 AC104971.1-201ENST00000495117 578 ntBASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 AC083829.1-201ENST00000503756 657 ntBASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 SNORD116-26-201ENST00000516006 96 ntBASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 AC090819.1-201ENST00000523800 1111 ntBASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PCDHGA1Q9Y5H4 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms