Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC106900.2-201ENST00000604994 317 ntBASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 AC010205.1-201ENST00000616668 449 ntBASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 AL161420.1-201ENST00000619393 264 ntBASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 AC241377.1-201ENST00000619797 406 ntBASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 AP005212.3-201ENST00000619964 528 ntBASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.69□□□□□ -1.34
PCDHGA11Q9Y5H2 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 Y_RNA.255-201ENST00000364581 97 ntBASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 EIF5P1-201ENST00000400019 1231 ntBASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 MIR541-201ENST00000401360 84 ntBASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 RPL12P10-201ENST00000413498 498 ntBASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 AC048351.1-201ENST00000420064 602 ntBASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 AC137499.1-201ENST00000427602 88 ntBASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 RPL37P1-201ENST00000432310 284 ntBASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 GAPDHP53-201ENST00000458397 924 ntBASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 AC078785.3-201ENST00000476607 425 ntBASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 RN7SL563P-201ENST00000481233 298 ntBASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 AC011005.3-201ENST00000491624 395 ntBASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 EIF4EP3-201ENST00000498782 656 ntBASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 AC093677.1-201ENST00000514414 678 ntBASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 RNU6-1314P-201ENST00000517139 104 ntBASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 ZNF705CP-201ENST00000530515 889 ntBASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 LSM6P2-201ENST00000552208 177 ntBASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 AL109628.1-201ENST00000556877 366 ntBASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 MIR4742-201ENST00000581069 85 ntBASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 AC098848.2-201ENST00000588023 330 ntBASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 AC087763.1-201ENST00000603391 286 ntBASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 AC012510.1-201ENST00000607946 759 ntBASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 AC130324.3-201ENST00000614165 542 ntBASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 AC009318.4-201ENST00000620496 486 ntBASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 GOT2P1-201ENST00000440922 1309 ntBASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 AC119674.1-204ENST00000641348 1343 ntBASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 HSP90AA2P-201ENST00000530115 2196 ntBASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PCDHGA11Q9Y5H2 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 MAPK10-261ENST00000641050 3109 ntBASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 TTC41P-205ENST00000551270 3963 ntBASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 AL161781.1-201ENST00000354277 403 ntBASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 Y_RNA.132-201ENST00000363421 102 ntBASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 Y_RNA.144-201ENST00000363521 113 ntBASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 RPL32P23-201ENST00000397237 405 ntBASIC6.67□□□□□ -1.34
PCDHGA11Q9Y5H2 PRRC2CP1-201ENST00000404428 159 ntBASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms