Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 RPS12P10-201ENST00000427031 377 ntBASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 RAB28P3-201ENST00000448325 597 ntBASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 C1DP3-201ENST00000455013 423 ntBASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 RPL31P53-201ENST00000457065 348 ntBASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 AC007686.1-201ENST00000488511 463 ntBASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 RN7SKP92-201ENST00000517266 244 ntBASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 CDH12P4-201ENST00000517835 295 ntBASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 CDH12P3-201ENST00000517935 295 ntBASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 CDH12P1-201ENST00000518435 295 ntBASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 AC084783.1-201ENST00000565846 910 ntBASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 AL360157.1-201ENST00000565962 87 ntBASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 HMGB1P50-201ENST00000605814 607 ntBASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 AC004948.1-201ENST00000609858 672 ntBASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 AC019193.2-201ENST00000610012 634 ntBASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 NOL8P1-201ENST00000508336 3529 ntBASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.05□□□□□ -1.76
TRAPPC4Q9Y296 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TRAPPC4Q9Y296 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.04□□□□□ -1.76
TRAPPC4Q9Y296 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.04□□□□□ -1.76
TRAPPC4Q9Y296 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.04□□□□□ -1.76
TRAPPC4Q9Y296 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TRAPPC4Q9Y296 NXPH1-205ENST00000602349 1953 ntBASIC4.04□□□□□ -1.76
TRAPPC4Q9Y296 AC139769.1-204ENST00000472297 1931 ntBASIC4.04□□□□□ -1.76
TRAPPC4Q9Y296 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TRAPPC4Q9Y296 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
TRAPPC4Q9Y296 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TRAPPC4Q9Y296 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.04□□□□□ -1.76
TRAPPC4Q9Y296 AC073136.2-201ENST00000417282 849 ntBASIC4.04□□□□□ -1.76
TRAPPC4Q9Y296 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.04□□□□□ -1.76
TRAPPC4Q9Y296 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.04□□□□□ -1.76
TRAPPC4Q9Y296 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.04□□□□□ -1.76
TRAPPC4Q9Y296 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.04□□□□□ -1.76
TRAPPC4Q9Y296 AP001324.1-201ENST00000428553 399 ntBASIC4.04□□□□□ -1.76
TRAPPC4Q9Y296 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.04□□□□□ -1.76
TRAPPC4Q9Y296 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.04□□□□□ -1.76
TRAPPC4Q9Y296 AP000936.3-201ENST00000438127 255 ntBASIC4.04□□□□□ -1.76
TRAPPC4Q9Y296 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.04□□□□□ -1.76
TRAPPC4Q9Y296 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.04□□□□□ -1.76
TRAPPC4Q9Y296 AC022431.1-201ENST00000450941 438 ntBASIC4.04□□□□□ -1.76
TRAPPC4Q9Y296 HMGB3P22-202ENST00000451823 572 ntBASIC4.04□□□□□ -1.76
TRAPPC4Q9Y296 AL133477.1-201ENST00000457472 514 ntBASIC4.04□□□□□ -1.76
TRAPPC4Q9Y296 MTND6P32-201ENST00000457611 483 ntBASIC4.04□□□□□ -1.76
TRAPPC4Q9Y296 RPS23P1-201ENST00000491662 432 ntBASIC4.04□□□□□ -1.76
TRAPPC4Q9Y296 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.04□□□□□ -1.76
TRAPPC4Q9Y296 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.04□□□□□ -1.76
TRAPPC4Q9Y296 ATG10-AS1-201ENST00000504846 648 ntBASIC4.04□□□□□ -1.76
TRAPPC4Q9Y296 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
TRAPPC4Q9Y296 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.04□□□□□ -1.76
TRAPPC4Q9Y296 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.04□□□□□ -1.76
TRAPPC4Q9Y296 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.04□□□□□ -1.76
TRAPPC4Q9Y296 RNA5SP497-201ENST00000516081 97 ntBASIC4.04□□□□□ -1.76
TRAPPC4Q9Y296 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
TRAPPC4Q9Y296 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
TRAPPC4Q9Y296 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC4.04□□□□□ -1.76
TRAPPC4Q9Y296 AC027281.1-201ENST00000574178 758 ntBASIC4.04□□□□□ -1.76
TRAPPC4Q9Y296 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.04□□□□□ -1.76
TRAPPC4Q9Y296 AC008782.1-201ENST00000603386 430 ntBASIC4.04□□□□□ -1.76
TRAPPC4Q9Y296 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.04□□□□□ -1.76
TRAPPC4Q9Y296 AC016911.1-201ENST00000613297 452 ntBASIC4.04□□□□□ -1.76
TRAPPC4Q9Y296 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.04□□□□□ -1.76
TRAPPC4Q9Y296 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.04□□□□□ -1.76
TRAPPC4Q9Y296 AC015908.5-201ENST00000623289 343 ntBASIC4.04□□□□□ -1.76
TRAPPC4Q9Y296 AC006065.6-201ENST00000625201 545 ntBASIC4.04□□□□□ -1.76
TRAPPC4Q9Y296 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TRAPPC4Q9Y296 VPS35P1-201ENST00000563400 1518 ntBASIC4.04□□□□□ -1.76
TRAPPC4Q9Y296 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TRAPPC4Q9Y296 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TRAPPC4Q9Y296 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
TRAPPC4Q9Y296 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
TRAPPC4Q9Y296 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.03□□□□□ -1.76
TRAPPC4Q9Y296 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
TRAPPC4Q9Y296 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.03□□□□□ -1.76
TRAPPC4Q9Y296 MFSD8-216ENST00000641147 4009 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms