Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 RPS23P10-201ENST00000416185 486 ntBASIC5.14□□□□□ -1.59
UPF3BQ9BZI7 DYNLL1P7-201ENST00000429273 258 ntBASIC5.14□□□□□ -1.59
UPF3BQ9BZI7 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.14□□□□□ -1.59
UPF3BQ9BZI7 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.14□□□□□ -1.59
UPF3BQ9BZI7 AC108145.1-201ENST00000503770 153 ntBASIC5.14□□□□□ -1.59
UPF3BQ9BZI7 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.14□□□□□ -1.59
UPF3BQ9BZI7 IGLVIV-65-201ENST00000517313 360 ntBASIC5.14□□□□□ -1.59
UPF3BQ9BZI7 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
UPF3BQ9BZI7 IGKV2-23-201ENST00000518729 323 ntBASIC5.14□□□□□ -1.59
UPF3BQ9BZI7 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
UPF3BQ9BZI7 AC124068.1-201ENST00000563131 678 ntBASIC5.14□□□□□ -1.59
UPF3BQ9BZI7 AC034105.4-201ENST00000568304 277 ntBASIC5.14□□□□□ -1.59
UPF3BQ9BZI7 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.14□□□□□ -1.59
UPF3BQ9BZI7 AC067959.1-201ENST00000604334 379 ntBASIC5.14□□□□□ -1.59
UPF3BQ9BZI7 AL031666.3-201ENST00000609320 1006 ntBASIC5.14□□□□□ -1.59
UPF3BQ9BZI7 AL021997.2-201ENST00000615674 271 ntBASIC5.14□□□□□ -1.59
UPF3BQ9BZI7 AP005019.3-201ENST00000620418 560 ntBASIC5.14□□□□□ -1.59
UPF3BQ9BZI7 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.14□□□□□ -1.59
UPF3BQ9BZI7 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.14□□□□□ -1.59
UPF3BQ9BZI7 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
UPF3BQ9BZI7 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.14□□□□□ -1.59
UPF3BQ9BZI7 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
UPF3BQ9BZI7 OR56B2P-202ENST00000641377 2453 ntBASIC5.14□□□□□ -1.59
UPF3BQ9BZI7 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
UPF3BQ9BZI7 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
UPF3BQ9BZI7 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
UPF3BQ9BZI7 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.13□□□□□ -1.59
UPF3BQ9BZI7 AC006971.1-201ENST00000407916 4486 ntBASIC5.13□□□□□ -1.59
UPF3BQ9BZI7 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
UPF3BQ9BZI7 RNA5SP52-201ENST00000362448 134 ntBASIC5.13□□□□□ -1.59
UPF3BQ9BZI7 SNORA70C-201ENST00000384538 135 ntBASIC5.13□□□□□ -1.59
UPF3BQ9BZI7 OR6C69P-201ENST00000394268 893 ntBASIC5.13□□□□□ -1.59
UPF3BQ9BZI7 RPS24P12-201ENST00000402084 394 ntBASIC5.13□□□□□ -1.59
UPF3BQ9BZI7 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.13□□□□□ -1.59
UPF3BQ9BZI7 EIF4EP1-201ENST00000422311 642 ntBASIC5.13□□□□□ -1.59
UPF3BQ9BZI7 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.13□□□□□ -1.59
UPF3BQ9BZI7 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.13□□□□□ -1.59
UPF3BQ9BZI7 RPL23AP52-201ENST00000439311 478 ntBASIC5.13□□□□□ -1.59
UPF3BQ9BZI7 ARAFP2-201ENST00000440565 559 ntBASIC5.13□□□□□ -1.59
UPF3BQ9BZI7 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.13□□□□□ -1.59
UPF3BQ9BZI7 AC113430.1-201ENST00000506872 718 ntBASIC5.13□□□□□ -1.59
UPF3BQ9BZI7 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.13□□□□□ -1.59
UPF3BQ9BZI7 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.13□□□□□ -1.59
UPF3BQ9BZI7 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
UPF3BQ9BZI7 EIF4A2P1-201ENST00000587313 1063 ntBASIC5.13□□□□□ -1.59
UPF3BQ9BZI7 AC245389.1-201ENST00000605141 529 ntBASIC5.13□□□□□ -1.59
UPF3BQ9BZI7 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.13□□□□□ -1.59
UPF3BQ9BZI7 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC5.13□□□□□ -1.59
UPF3BQ9BZI7 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
UPF3BQ9BZI7 AC016588.2-201ENST00000632484 3021 ntBASIC5.13□□□□□ -1.59
UPF3BQ9BZI7 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
UPF3BQ9BZI7 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
UPF3BQ9BZI7 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
UPF3BQ9BZI7 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.13□□□□□ -1.59
UPF3BQ9BZI7 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
UPF3BQ9BZI7 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
UPF3BQ9BZI7 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
UPF3BQ9BZI7 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
UPF3BQ9BZI7 AC105074.1-201ENST00000623380 3095 ntBASIC5.12□□□□□ -1.59
UPF3BQ9BZI7 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
UPF3BQ9BZI7 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
UPF3BQ9BZI7 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
UPF3BQ9BZI7 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
UPF3BQ9BZI7 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC5.12□□□□□ -1.59
UPF3BQ9BZI7 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
UPF3BQ9BZI7 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
UPF3BQ9BZI7 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.12□□□□□ -1.59
UPF3BQ9BZI7 PTP4A1P1-201ENST00000420539 515 ntBASIC5.12□□□□□ -1.59
UPF3BQ9BZI7 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.12□□□□□ -1.59
UPF3BQ9BZI7 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.12□□□□□ -1.59
UPF3BQ9BZI7 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC5.12□□□□□ -1.59
UPF3BQ9BZI7 EIF2S2P5-201ENST00000457635 968 ntBASIC5.12□□□□□ -1.59
UPF3BQ9BZI7 AC011276.1-201ENST00000469688 323 ntBASIC5.12□□□□□ -1.59
UPF3BQ9BZI7 AC104164.2-201ENST00000496953 495 ntBASIC5.12□□□□□ -1.59
UPF3BQ9BZI7 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.12□□□□□ -1.59
UPF3BQ9BZI7 AC027176.2-201ENST00000559166 746 ntBASIC5.12□□□□□ -1.59
UPF3BQ9BZI7 CYP4A43P-201ENST00000568156 121 ntBASIC5.12□□□□□ -1.59
UPF3BQ9BZI7 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC5.12□□□□□ -1.59
UPF3BQ9BZI7 MIR4429-201ENST00000580105 73 ntBASIC5.12□□□□□ -1.59
UPF3BQ9BZI7 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.12□□□□□ -1.59
UPF3BQ9BZI7 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
UPF3BQ9BZI7 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
UPF3BQ9BZI7 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
UPF3BQ9BZI7 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
UPF3BQ9BZI7 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
UPF3BQ9BZI7 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
UPF3BQ9BZI7 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
UPF3BQ9BZI7 AC025031.4-201ENST00000621248 3271 ntBASIC5.12□□□□□ -1.59
UPF3BQ9BZI7 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
UPF3BQ9BZI7 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.11□□□□□ -1.59
UPF3BQ9BZI7 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC5.11□□□□□ -1.59
UPF3BQ9BZI7 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC5.11□□□□□ -1.59
UPF3BQ9BZI7 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
UPF3BQ9BZI7 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
UPF3BQ9BZI7 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
UPF3BQ9BZI7 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC5.11□□□□□ -1.59
UPF3BQ9BZI7 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.11□□□□□ -1.59
UPF3BQ9BZI7 OR5P1P-201ENST00000299512 925 ntBASIC5.11□□□□□ -1.59
UPF3BQ9BZI7 RNA5SP28-201ENST00000363841 119 ntBASIC5.11□□□□□ -1.59
UPF3BQ9BZI7 RNA5SP509-201ENST00000364577 119 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms