Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 SNORD65.1-201ENST00000390889 71 ntBASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 AL031985.1-201ENST00000392713 418 ntBASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 SKINT1L-201ENST00000401057 817 ntBASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 RNU4-72P-201ENST00000410754 173 ntBASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 PTP4A1P5-201ENST00000420305 455 ntBASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 UBE2V1P1-201ENST00000430836 445 ntBASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 AC090018.1-201ENST00000434369 367 ntBASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 AC092393.1-201ENST00000439625 742 ntBASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 MTND3P1-201ENST00000441336 220 ntBASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 FHP1-201ENST00000442741 703 ntBASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 MTCO2P25-201ENST00000447065 681 ntBASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 AC090804.1-201ENST00000448870 490 ntBASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 RPL21P134-201ENST00000453468 483 ntBASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 RPL37P3-201ENST00000456825 293 ntBASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 AC015724.1-201ENST00000478577 156 ntBASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 COX6B1P2-201ENST00000489624 230 ntBASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 AC090638.1-201ENST00000498296 909 ntBASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 RPF2P2-201ENST00000504693 896 ntBASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 MTCO3P28-201ENST00000513351 515 ntBASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 AC040958.1-201ENST00000561102 201 ntBASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 MTCYBP13-201ENST00000578634 1093 ntBASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 AC108738.1-201ENST00000603703 237 ntBASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 AC080013.6-201ENST00000606185 215 ntBASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 AL451074.6-201ENST00000608512 729 ntBASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 AP004247.3-201ENST00000608682 624 ntBASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 AC244107.2-201ENST00000611773 76 ntBASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 AC009318.3-201ENST00000616916 503 ntBASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 AP000676.3-201ENST00000623299 569 ntBASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 AL512506.2-201ENST00000624472 458 ntBASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 AP003400.3-201ENST00000624904 346 ntBASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 MIR4278-201ENST00000636094 69 ntBASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 AC074101.1-201ENST00000637861 241 ntBASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 AC103706.2-201ENST00000638080 240 ntBASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 MTND5P31-201ENST00000419366 1374 ntBASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.28□□□□□ -1.56
TRIM54Q9BYV2 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 AL513185.3-201ENST00000433335 1300 ntBASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 DCAF13P3-201ENST00000561147 1334 ntBASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 RN7SKP153-201ENST00000365026 316 ntBASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 RNU6-619P-201ENST00000365146 108 ntBASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 RN7SKP293-201ENST00000411389 296 ntBASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 RNU2-6P-201ENST00000411404 190 ntBASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 SRSF1P1-201ENST00000424058 520 ntBASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 AC234781.2-201ENST00000426370 994 ntBASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 RPL19P16-201ENST00000433839 588 ntBASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 SEPT7P5-201ENST00000434048 306 ntBASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 PPIAP13-201ENST00000434706 478 ntBASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 UBE2D3P1-201ENST00000436669 444 ntBASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 MTCYBP34-201ENST00000439552 670 ntBASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 AC073909.1-201ENST00000447112 999 ntBASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM54Q9BYV2 GAPDHP36-201ENST00000480688 918 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms