Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 MYLK-221ENST00000583087 678 ntTSL 4 BASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 AP001542.2-201ENST00000593141 364 ntBASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 AL590392.1-201ENST00000604960 446 ntBASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 AC106052.1-201ENST00000608029 497 ntBASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 AL445423.1-201ENST00000609941 536 ntBASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 AC068831.8-201ENST00000620171 435 ntBASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 AC123767.1-202ENST00000620407 817 ntBASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 AL359757.1-201ENST00000623176 255 ntBASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 AC017104.5-201ENST00000637647 639 ntBASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 TTC39DP-201ENST00000416781 1688 ntBASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
RTFDC1Q9BY42 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RTFDC1Q9BY42 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RTFDC1Q9BY42 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC6.05□□□□□ -1.44
RTFDC1Q9BY42 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
RTFDC1Q9BY42 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
RTFDC1Q9BY42 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RTFDC1Q9BY42 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
RTFDC1Q9BY42 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
RTFDC1Q9BY42 NCLP2-201ENST00000416078 1462 ntBASIC6.05□□□□□ -1.44
RTFDC1Q9BY42 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
RTFDC1Q9BY42 FAM3C2-201ENST00000312214 681 ntBASIC6.05□□□□□ -1.44
RTFDC1Q9BY42 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC6.05□□□□□ -1.44
RTFDC1Q9BY42 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
RTFDC1Q9BY42 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC6.05□□□□□ -1.44
RTFDC1Q9BY42 GSTM3P2-201ENST00000412746 530 ntBASIC6.05□□□□□ -1.44
RTFDC1Q9BY42 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RTFDC1Q9BY42 CHIAP3-201ENST00000423668 1133 ntBASIC6.05□□□□□ -1.44
RTFDC1Q9BY42 IGKV1OR9-1-201ENST00000424370 284 ntBASIC6.05□□□□□ -1.44
RTFDC1Q9BY42 AC092634.2-201ENST00000428146 1010 ntBASIC6.05□□□□□ -1.44
RTFDC1Q9BY42 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC6.05□□□□□ -1.44
RTFDC1Q9BY42 CBX1P4-201ENST00000439415 457 ntBASIC6.05□□□□□ -1.44
RTFDC1Q9BY42 FHP1-201ENST00000442741 703 ntBASIC6.05□□□□□ -1.44
RTFDC1Q9BY42 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC6.05□□□□□ -1.44
RTFDC1Q9BY42 HMGB3P6-201ENST00000444896 598 ntBASIC6.05□□□□□ -1.44
RTFDC1Q9BY42 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC6.05□□□□□ -1.44
RTFDC1Q9BY42 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
RTFDC1Q9BY42 RPS27AP18-201ENST00000515536 459 ntBASIC6.05□□□□□ -1.44
RTFDC1Q9BY42 OR5M2P-201ENST00000529003 936 ntBASIC6.05□□□□□ -1.44
RTFDC1Q9BY42 DEFB130C-202ENST00000530001 230 ntBASIC6.05□□□□□ -1.44
RTFDC1Q9BY42 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6.05□□□□□ -1.44
RTFDC1Q9BY42 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC6.05□□□□□ -1.44
RTFDC1Q9BY42 AC007497.1-201ENST00000610421 561 ntBASIC6.05□□□□□ -1.44
RTFDC1Q9BY42 AC023509.5-201ENST00000617434 807 ntBASIC6.05□□□□□ -1.44
RTFDC1Q9BY42 AC009704.2-201ENST00000618739 483 ntBASIC6.05□□□□□ -1.44
RTFDC1Q9BY42 AC015726.3-201ENST00000624501 418 ntBASIC6.05□□□□□ -1.44
RTFDC1Q9BY42 GMFB-210ENST00000628554 639 ntTSL 4 BASIC6.05□□□□□ -1.44
RTFDC1Q9BY42 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RTFDC1Q9BY42 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RTFDC1Q9BY42 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
RTFDC1Q9BY42 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RTFDC1Q9BY42 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.05□□□□□ -1.44
RTFDC1Q9BY42 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RTFDC1Q9BY42 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RTFDC1Q9BY42 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC6.05□□□□□ -1.44
RTFDC1Q9BY42 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.05□□□□□ -1.44
RTFDC1Q9BY42 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 OFD1P9Y-201ENST00000417699 1491 ntBASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 RNF6P1-201ENST00000444889 1784 ntBASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 RNU4-51P-201ENST00000364206 140 ntBASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 MIR129-1-201ENST00000384972 72 ntBASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 SNORA48.4-201ENST00000391089 134 ntBASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 RNA5SP241-201ENST00000391326 114 ntBASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 AL390316.1-201ENST00000406279 553 ntBASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 OR51B3P-201ENST00000412287 913 ntBASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 AL592310.1-201ENST00000414330 671 ntBASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 CENPIP1-201ENST00000425713 902 ntBASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 HMGB3P5-201ENST00000428894 612 ntBASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 OR2B7P-201ENST00000429302 934 ntBASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 MTND2P40-201ENST00000436718 841 ntBASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 TRIM60P9Y-201ENST00000438459 816 ntBASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 TRIM60P11Y-201ENST00000445313 801 ntBASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 AC010733.1-201ENST00000451515 401 ntBASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 RPS5P7-201ENST00000456664 608 ntBASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 AC098862.1-201ENST00000504991 413 ntBASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 AC020699.1-201ENST00000505161 445 ntBASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 RN7SKP122-201ENST00000515923 296 ntBASIC6.04□□□□□ -1.44
RTFDC1Q9BY42 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms