Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.86□□□□□ -1.63
CDK5RAP2Q96SN8 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.86□□□□□ -1.63
CDK5RAP2Q96SN8 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
CDK5RAP2Q96SN8 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CDK5RAP2Q96SN8 VPS35P1-201ENST00000563400 1518 ntBASIC4.86□□□□□ -1.63
CDK5RAP2Q96SN8 AC019072.1-201ENST00000604535 1551 ntBASIC4.86□□□□□ -1.63
CDK5RAP2Q96SN8 CASC19-261ENST00000641853 1638 ntBASIC4.86□□□□□ -1.63
CDK5RAP2Q96SN8 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CDK5RAP2Q96SN8 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
CDK5RAP2Q96SN8 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.86□□□□□ -1.63
CDK5RAP2Q96SN8 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CDK5RAP2Q96SN8 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CDK5RAP2Q96SN8 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CDK5RAP2Q96SN8 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.86□□□□□ -1.63
CDK5RAP2Q96SN8 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CDK5RAP2Q96SN8 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CDK5RAP2Q96SN8 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
CDK5RAP2Q96SN8 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CDK5RAP2Q96SN8 MIR208A-201ENST00000362287 71 ntBASIC4.86□□□□□ -1.63
CDK5RAP2Q96SN8 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.86□□□□□ -1.63
CDK5RAP2Q96SN8 U8.11-201ENST00000384699 133 ntBASIC4.86□□□□□ -1.63
CDK5RAP2Q96SN8 U8.12-201ENST00000384701 133 ntBASIC4.86□□□□□ -1.63
CDK5RAP2Q96SN8 VN1R8P-201ENST00000407739 893 ntBASIC4.86□□□□□ -1.63
CDK5RAP2Q96SN8 AC017078.1-201ENST00000416146 368 ntBASIC4.86□□□□□ -1.63
CDK5RAP2Q96SN8 GNG5P5-201ENST00000420444 220 ntBASIC4.86□□□□□ -1.63
CDK5RAP2Q96SN8 HMGB3P5-201ENST00000428894 612 ntBASIC4.86□□□□□ -1.63
CDK5RAP2Q96SN8 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.86□□□□□ -1.63
CDK5RAP2Q96SN8 U8.18-201ENST00000459285 133 ntBASIC4.86□□□□□ -1.63
CDK5RAP2Q96SN8 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.86□□□□□ -1.63
CDK5RAP2Q96SN8 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.86□□□□□ -1.63
CDK5RAP2Q96SN8 TRMT10BP1-201ENST00000519377 943 ntBASIC4.86□□□□□ -1.63
CDK5RAP2Q96SN8 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.86□□□□□ -1.63
CDK5RAP2Q96SN8 CCNG2P1-201ENST00000549521 1000 ntBASIC4.86□□□□□ -1.63
CDK5RAP2Q96SN8 AC107982.3-201ENST00000584957 985 ntBASIC4.86□□□□□ -1.63
CDK5RAP2Q96SN8 SNORD91B-202ENST00000608459 222 ntBASIC4.86□□□□□ -1.63
CDK5RAP2Q96SN8 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.86□□□□□ -1.63
CDK5RAP2Q96SN8 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.86□□□□□ -1.63
CDK5RAP2Q96SN8 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
CDK5RAP2Q96SN8 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
CDK5RAP2Q96SN8 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
CDK5RAP2Q96SN8 HSPD1P11-201ENST00000508643 1702 ntBASIC4.85□□□□□ -1.63
CDK5RAP2Q96SN8 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.85□□□□□ -1.63
CDK5RAP2Q96SN8 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.85□□□□□ -1.63
CDK5RAP2Q96SN8 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
CDK5RAP2Q96SN8 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
CDK5RAP2Q96SN8 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CDK5RAP2Q96SN8 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
CDK5RAP2Q96SN8 RNA5SP372-201ENST00000390836 115 ntBASIC4.85□□□□□ -1.63
CDK5RAP2Q96SN8 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.85□□□□□ -1.63
CDK5RAP2Q96SN8 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.85□□□□□ -1.63
CDK5RAP2Q96SN8 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.85□□□□□ -1.63
CDK5RAP2Q96SN8 DYNLL1P7-201ENST00000429273 258 ntBASIC4.85□□□□□ -1.63
CDK5RAP2Q96SN8 GOT2P5-201ENST00000433995 546 ntBASIC4.85□□□□□ -1.63
CDK5RAP2Q96SN8 RPL7P1-201ENST00000468161 747 ntBASIC4.85□□□□□ -1.63
CDK5RAP2Q96SN8 RPL7P9-201ENST00000468715 747 ntBASIC4.85□□□□□ -1.63
CDK5RAP2Q96SN8 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CDK5RAP2Q96SN8 RPS3AP6-201ENST00000484430 795 ntBASIC4.85□□□□□ -1.63
CDK5RAP2Q96SN8 MTND4LP31-201ENST00000514859 294 ntBASIC4.85□□□□□ -1.63
CDK5RAP2Q96SN8 AC023632.4-201ENST00000517783 191 ntBASIC4.85□□□□□ -1.63
CDK5RAP2Q96SN8 IGLV3-26-201ENST00000520756 302 ntBASIC4.85□□□□□ -1.63
CDK5RAP2Q96SN8 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.85□□□□□ -1.63
CDK5RAP2Q96SN8 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CDK5RAP2Q96SN8 SETP1-201ENST00000556014 845 ntBASIC4.85□□□□□ -1.63
CDK5RAP2Q96SN8 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.85□□□□□ -1.63
CDK5RAP2Q96SN8 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.85□□□□□ -1.63
CDK5RAP2Q96SN8 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.85□□□□□ -1.63
CDK5RAP2Q96SN8 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
CDK5RAP2Q96SN8 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CDK5RAP2Q96SN8 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CDK5RAP2Q96SN8 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CDK5RAP2Q96SN8 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
CDK5RAP2Q96SN8 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.85□□□□□ -1.63
CDK5RAP2Q96SN8 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CDK5RAP2Q96SN8 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CDK5RAP2Q96SN8 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.85□□□□□ -1.63
CDK5RAP2Q96SN8 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDK5RAP2Q96SN8 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.84□□□□□ -1.63
CDK5RAP2Q96SN8 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.84□□□□□ -1.63
CDK5RAP2Q96SN8 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CDK5RAP2Q96SN8 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDK5RAP2Q96SN8 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.84□□□□□ -1.63
CDK5RAP2Q96SN8 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDK5RAP2Q96SN8 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.84□□□□□ -1.63
CDK5RAP2Q96SN8 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.84□□□□□ -1.63
CDK5RAP2Q96SN8 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
CDK5RAP2Q96SN8 RPL29P14-201ENST00000495837 428 ntBASIC4.84□□□□□ -1.63
CDK5RAP2Q96SN8 RNA5SP179-201ENST00000517284 121 ntBASIC4.84□□□□□ -1.63
CDK5RAP2Q96SN8 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.84□□□□□ -1.63
CDK5RAP2Q96SN8 MIR432-201ENST00000606207 94 ntBASIC4.84□□□□□ -1.63
CDK5RAP2Q96SN8 MIR7154-201ENST00000620673 73 ntBASIC4.84□□□□□ -1.63
CDK5RAP2Q96SN8 AL356863.1-201ENST00000623378 1080 ntBASIC4.84□□□□□ -1.63
CDK5RAP2Q96SN8 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.84□□□□□ -1.63
CDK5RAP2Q96SN8 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CDK5RAP2Q96SN8 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CDK5RAP2Q96SN8 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.84□□□□□ -1.63
CDK5RAP2Q96SN8 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CDK5RAP2Q96SN8 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
CDK5RAP2Q96SN8 CYP1D1P-201ENST00000416662 1433 ntBASIC4.84□□□□□ -1.64
CDK5RAP2Q96SN8 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
CDK5RAP2Q96SN8 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.84□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms