Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SHROOM3Q8TF72 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.36□□□□□ -1.71
SHROOM3Q8TF72 CEACAMP1-201ENST00000434624 1035 ntBASIC4.36□□□□□ -1.71
SHROOM3Q8TF72 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.36□□□□□ -1.71
SHROOM3Q8TF72 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.36□□□□□ -1.71
SHROOM3Q8TF72 NPM1P21-201ENST00000513394 762 ntBASIC4.36□□□□□ -1.71
SHROOM3Q8TF72 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.36□□□□□ -1.71
SHROOM3Q8TF72 TCP11X3P-202ENST00000514289 1254 ntBASIC4.36□□□□□ -1.71
SHROOM3Q8TF72 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SHROOM3Q8TF72 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.36□□□□□ -1.71
SHROOM3Q8TF72 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.36□□□□□ -1.71
SHROOM3Q8TF72 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.36□□□□□ -1.71
SHROOM3Q8TF72 MIR3124-201ENST00000582636 67 ntBASIC4.36□□□□□ -1.71
SHROOM3Q8TF72 AC069200.1-201ENST00000609511 323 ntBASIC4.36□□□□□ -1.71
SHROOM3Q8TF72 ZYXP1-201ENST00000617638 118 ntBASIC4.36□□□□□ -1.71
SHROOM3Q8TF72 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SHROOM3Q8TF72 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
SHROOM3Q8TF72 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
SHROOM3Q8TF72 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SHROOM3Q8TF72 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SHROOM3Q8TF72 DDX18P4-201ENST00000511690 1966 ntBASIC4.36□□□□□ -1.71
SHROOM3Q8TF72 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SHROOM3Q8TF72 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.35□□□□□ -1.71
SHROOM3Q8TF72 RNA5SP146-201ENST00000410743 123 ntBASIC4.35□□□□□ -1.71
SHROOM3Q8TF72 OR5BE1P-201ENST00000425977 939 ntBASIC4.35□□□□□ -1.71
SHROOM3Q8TF72 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.35□□□□□ -1.71
SHROOM3Q8TF72 RPL23AP46-201ENST00000438548 490 ntBASIC4.35□□□□□ -1.71
SHROOM3Q8TF72 TPT1P3-201ENST00000492841 512 ntBASIC4.35□□□□□ -1.71
SHROOM3Q8TF72 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.35□□□□□ -1.71
SHROOM3Q8TF72 RNA5SP49-201ENST00000516450 115 ntBASIC4.35□□□□□ -1.71
SHROOM3Q8TF72 MIR2116-201ENST00000517221 80 ntBASIC4.35□□□□□ -1.71
SHROOM3Q8TF72 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.35□□□□□ -1.71
SHROOM3Q8TF72 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.35□□□□□ -1.71
SHROOM3Q8TF72 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.35□□□□□ -1.71
SHROOM3Q8TF72 MIR7702-201ENST00000621931 59 ntBASIC4.35□□□□□ -1.71
SHROOM3Q8TF72 OR5BE1P-202ENST00000641168 1176 ntBASIC4.35□□□□□ -1.71
SHROOM3Q8TF72 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SHROOM3Q8TF72 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
SHROOM3Q8TF72 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
SHROOM3Q8TF72 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
SHROOM3Q8TF72 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SHROOM3Q8TF72 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SHROOM3Q8TF72 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.35□□□□□ -1.71
SHROOM3Q8TF72 RNU1-15P-201ENST00000353977 144 ntBASIC4.34□□□□□ -1.71
SHROOM3Q8TF72 SNORD66.1-201ENST00000391230 76 ntBASIC4.34□□□□□ -1.71
SHROOM3Q8TF72 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.34□□□□□ -1.71
SHROOM3Q8TF72 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.34□□□□□ -1.71
SHROOM3Q8TF72 AC041039.1-201ENST00000485656 536 ntBASIC4.34□□□□□ -1.71
SHROOM3Q8TF72 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.34□□□□□ -1.71
SHROOM3Q8TF72 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.34□□□□□ -1.71
SHROOM3Q8TF72 RNA5SP519-201ENST00000516480 119 ntBASIC4.34□□□□□ -1.71
SHROOM3Q8TF72 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SHROOM3Q8TF72 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.34□□□□□ -1.71
SHROOM3Q8TF72 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.34□□□□□ -1.71
SHROOM3Q8TF72 AC025884.1-201ENST00000556034 378 ntBASIC4.34□□□□□ -1.71
SHROOM3Q8TF72 AC006272.2-201ENST00000594725 163 ntBASIC4.34□□□□□ -1.71
SHROOM3Q8TF72 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.34□□□□□ -1.71
SHROOM3Q8TF72 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
SHROOM3Q8TF72 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SHROOM3Q8TF72 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.34□□□□□ -1.71
SHROOM3Q8TF72 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SHROOM3Q8TF72 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.34□□□□□ -1.71
SHROOM3Q8TF72 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SHROOM3Q8TF72 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.34□□□□□ -1.71
SHROOM3Q8TF72 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SHROOM3Q8TF72 RNU1-14P-201ENST00000362759 152 ntBASIC4.34□□□□□ -1.71
SHROOM3Q8TF72 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
SHROOM3Q8TF72 RNA5SP306-201ENST00000411087 107 ntBASIC4.34□□□□□ -1.71
SHROOM3Q8TF72 EIF4EP1-201ENST00000422311 642 ntBASIC4.34□□□□□ -1.71
SHROOM3Q8TF72 BTF3P10-201ENST00000433415 495 ntBASIC4.34□□□□□ -1.71
SHROOM3Q8TF72 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SHROOM3Q8TF72 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.34□□□□□ -1.71
SHROOM3Q8TF72 AL512326.1-201ENST00000443050 721 ntBASIC4.34□□□□□ -1.71
SHROOM3Q8TF72 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.34□□□□□ -1.71
SHROOM3Q8TF72 AC073587.1-201ENST00000447093 876 ntBASIC4.34□□□□□ -1.71
SHROOM3Q8TF72 AL133547.1-201ENST00000448546 220 ntBASIC4.34□□□□□ -1.71
SHROOM3Q8TF72 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.34□□□□□ -1.71
SHROOM3Q8TF72 RPL23AP2-201ENST00000471227 466 ntBASIC4.34□□□□□ -1.71
SHROOM3Q8TF72 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.34□□□□□ -1.71
SHROOM3Q8TF72 RPS27AP16-201ENST00000492222 470 ntBASIC4.34□□□□□ -1.71
SHROOM3Q8TF72 AC108022.1-201ENST00000493466 478 ntBASIC4.34□□□□□ -1.71
SHROOM3Q8TF72 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.34□□□□□ -1.71
SHROOM3Q8TF72 KRT19P6-201ENST00000510983 209 ntBASIC4.34□□□□□ -1.71
SHROOM3Q8TF72 SNORA74D-201ENST00000516404 141 ntBASIC4.34□□□□□ -1.71
SHROOM3Q8TF72 OR8R1P-201ENST00000543943 764 ntBASIC4.34□□□□□ -1.71
SHROOM3Q8TF72 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.34□□□□□ -1.71
SHROOM3Q8TF72 AC091953.5-201ENST00000622919 233 ntBASIC4.34□□□□□ -1.71
SHROOM3Q8TF72 HCFC2P1-201ENST00000392864 1592 ntBASIC4.34□□□□□ -1.72
SHROOM3Q8TF72 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
SHROOM3Q8TF72 AC083843.3-201ENST00000623679 2186 ntBASIC4.34□□□□□ -1.72
SHROOM3Q8TF72 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
SHROOM3Q8TF72 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
SHROOM3Q8TF72 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.33□□□□□ -1.72
SHROOM3Q8TF72 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SHROOM3Q8TF72 AC099654.3-201ENST00000447087 1546 ntBASIC4.33□□□□□ -1.72
SHROOM3Q8TF72 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SHROOM3Q8TF72 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SHROOM3Q8TF72 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.33□□□□□ -1.72
SHROOM3Q8TF72 AL161631.1-201ENST00000417933 486 ntBASIC4.33□□□□□ -1.72
SHROOM3Q8TF72 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 163.2 ms