Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 CDH12P2-201ENST00000504393 298 ntBASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 AC010486.2-201ENST00000505572 483 ntBASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 Y_RNA.688-201ENST00000516565 95 ntBASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 RNU6-1308P-201ENST00000516817 103 ntBASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 AGGF1P6-201ENST00000569213 976 ntBASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 AP002906.1-201ENST00000603405 233 ntBASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 AC095055.1-201ENST00000603472 1113 ntBASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 AL049844.2-201ENST00000604280 628 ntBASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 AC080013.6-201ENST00000606185 215 ntBASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 AL135786.2-201ENST00000608422 615 ntBASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 AP002505.2-201ENST00000623585 696 ntBASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 AC004943.3-201ENST00000624116 600 ntBASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 DDX18P4-201ENST00000511690 1966 ntBASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 AC104118.1-201ENST00000607625 1589 ntBASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CLIP4Q8N3C7 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 BMS1P3-201ENST00000372011 932 ntBASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 RNU6-932P-201ENST00000391108 106 ntBASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 CHMP1B2P-201ENST00000399581 597 ntBASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 SNORA77-201ENST00000408716 125 ntBASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 RN7SKP278-201ENST00000410504 342 ntBASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 RN7SKP126-201ENST00000411143 300 ntBASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 HMGB1P49-201ENST00000418882 569 ntBASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 AL035458.1-201ENST00000433096 585 ntBASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 PTGES3P1-201ENST00000439531 483 ntBASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 SEPT14P24-201ENST00000447236 180 ntBASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 AC092647.2-201ENST00000452998 253 ntBASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 AL691482.1-201ENST00000453255 87 ntBASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 HMGB1P4-201ENST00000455362 567 ntBASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 RPL7P32-201ENST00000457119 744 ntBASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 OR2AO1P-201ENST00000476497 403 ntBASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 AC073358.1-201ENST00000505671 684 ntBASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 AC008837.1-201ENST00000511513 412 ntBASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 AC010486.3-201ENST00000511602 785 ntBASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 TCP11X3P-202ENST00000514289 1254 ntBASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 AC012339.2-201ENST00000523996 453 ntBASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 OR11J2P-201ENST00000555298 907 ntBASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 AC116553.2-201ENST00000564203 463 ntBASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 AC009094.1-201ENST00000564443 426 ntBASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 ZNF92P3-201ENST00000596594 954 ntBASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 AL035411.2-201ENST00000604022 421 ntBASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 IMMP1LP3-201ENST00000604197 224 ntBASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 AC012557.1-201ENST00000607115 611 ntBASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 SNORD91B-202ENST00000608459 222 ntBASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 AC092106.3-201ENST00000611308 722 ntBASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 uc_338.18-201ENST00000615451 175 ntBASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 AC015660.5-201ENST00000623238 564 ntBASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CLIP4Q8N3C7 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms