Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
LINC00346Q8IVM7 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.51□□□□□ -1.69
LINC00346Q8IVM7 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
LINC00346Q8IVM7 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LINC00346Q8IVM7 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
LINC00346Q8IVM7 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.51□□□□□ -1.69
LINC00346Q8IVM7 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.51□□□□□ -1.69
LINC00346Q8IVM7 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
LINC00346Q8IVM7 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
LINC00346Q8IVM7 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
LINC00346Q8IVM7 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
LINC00346Q8IVM7 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.51□□□□□ -1.69
LINC00346Q8IVM7 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
LINC00346Q8IVM7 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 AC107081.3-201ENST00000612715 2034 ntBASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 SNORA2.3-201ENST00000383920 135 ntBASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 MTCO1P56-201ENST00000401674 224 ntBASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 MIR1182-201ENST00000408363 97 ntBASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 NUP35P2-201ENST00000416748 943 ntBASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 AC013429.2-201ENST00000418798 781 ntBASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 PAICSP7-201ENST00000419829 962 ntBASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 AC104333.2-201ENST00000422630 192 ntBASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 RPL7AP61-201ENST00000443410 636 ntBASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 SPRYD7P1-201ENST00000443861 570 ntBASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 AP000942.1-201ENST00000463969 747 ntBASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 RN7SL443P-201ENST00000464331 290 ntBASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 RPS20P21-201ENST00000466859 343 ntBASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 GAPDHP39-201ENST00000481866 979 ntBASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 UBA52P7-201ENST00000486088 380 ntBASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 EIF3LP3-201ENST00000495197 822 ntBASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 PGAM1P13-201ENST00000507497 754 ntBASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 AC010374.2-201ENST00000512933 535 ntBASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 AC004217.3-201ENST00000551552 878 ntBASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 AP005119.2-201ENST00000579735 1105 ntBASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 AC022069.1-201ENST00000582910 658 ntBASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 OR1AB1P-201ENST00000585564 761 ntBASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 BNIP3P39-201ENST00000601077 554 ntBASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 AL022067.1-201ENST00000602426 454 ntBASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 AC011453.2-201ENST00000603737 729 ntBASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 AC018695.5-201ENST00000605872 315 ntBASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 AP005432.2-201ENST00000608162 586 ntBASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 AP002505.2-201ENST00000623585 696 ntBASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 AP000648.2-201ENST00000624182 404 ntBASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 AC073342.3-201ENST00000624211 193 ntBASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 AL672167.1-205ENST00000641112 3080 ntBASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 AC111188.2-201ENST00000529697 1387 ntBASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 CASC19-221ENST00000641309 1382 ntBASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 AL355852.1-201ENST00000454081 1771 ntBASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 AC021242.1-201ENST00000507315 2035 ntBASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
LINC00346Q8IVM7 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
LINC00346Q8IVM7 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LINC00346Q8IVM7 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.49□□□□□ -1.69
LINC00346Q8IVM7 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LINC00346Q8IVM7 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.49□□□□□ -1.69
LINC00346Q8IVM7 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.49□□□□□ -1.69
LINC00346Q8IVM7 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
LINC00346Q8IVM7 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LINC00346Q8IVM7 AP000542.2-201ENST00000623199 6179 ntBASIC4.49□□□□□ -1.69
LINC00346Q8IVM7 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.49□□□□□ -1.69
LINC00346Q8IVM7 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
LINC00346Q8IVM7 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.49□□□□□ -1.69
LINC00346Q8IVM7 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.49□□□□□ -1.69
LINC00346Q8IVM7 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LINC00346Q8IVM7 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms