Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 RN7SKP293-201ENST00000411389 296 ntBASIC4.56□□□□□ -1.68
SHFQ7M4L6 HMGB1P49-201ENST00000418882 569 ntBASIC4.56□□□□□ -1.68
SHFQ7M4L6 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.56□□□□□ -1.68
SHFQ7M4L6 AC012075.1-201ENST00000436549 580 ntBASIC4.56□□□□□ -1.68
SHFQ7M4L6 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.56□□□□□ -1.68
SHFQ7M4L6 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SHFQ7M4L6 AL031584.1-201ENST00000447169 754 ntBASIC4.56□□□□□ -1.68
SHFQ7M4L6 AL591623.2-201ENST00000449978 222 ntBASIC4.56□□□□□ -1.68
SHFQ7M4L6 RPL35AP19-201ENST00000469425 329 ntBASIC4.56□□□□□ -1.68
SHFQ7M4L6 TRBV8-2-201ENST00000475637 270 ntBASIC4.56□□□□□ -1.68
SHFQ7M4L6 AC004263.1-201ENST00000479327 332 ntBASIC4.56□□□□□ -1.68
SHFQ7M4L6 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.56□□□□□ -1.68
SHFQ7M4L6 GTF2F2P1-201ENST00000511083 675 ntBASIC4.56□□□□□ -1.68
SHFQ7M4L6 AC005351.1-201ENST00000511152 786 ntBASIC4.56□□□□□ -1.68
SHFQ7M4L6 RNU6-941P-201ENST00000516346 108 ntBASIC4.56□□□□□ -1.68
SHFQ7M4L6 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.56□□□□□ -1.68
SHFQ7M4L6 AC027308.1-201ENST00000517993 110 ntBASIC4.56□□□□□ -1.68
SHFQ7M4L6 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.56□□□□□ -1.68
SHFQ7M4L6 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC4.56□□□□□ -1.68
SHFQ7M4L6 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC4.56□□□□□ -1.68
SHFQ7M4L6 AC124293.1-201ENST00000530034 493 ntBASIC4.56□□□□□ -1.68
SHFQ7M4L6 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
SHFQ7M4L6 AC023050.2-201ENST00000544968 387 ntBASIC4.56□□□□□ -1.68
SHFQ7M4L6 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.56□□□□□ -1.68
SHFQ7M4L6 MTND4LP24-201ENST00000572277 291 ntBASIC4.56□□□□□ -1.68
SHFQ7M4L6 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.56□□□□□ -1.68
SHFQ7M4L6 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.56□□□□□ -1.68
SHFQ7M4L6 EIF1P6-201ENST00000600054 334 ntBASIC4.56□□□□□ -1.68
SHFQ7M4L6 AC233280.2-201ENST00000603917 1070 ntBASIC4.56□□□□□ -1.68
SHFQ7M4L6 SUGT1P3-202ENST00000604259 383 ntBASIC4.56□□□□□ -1.68
SHFQ7M4L6 AC104695.2-201ENST00000605056 775 ntBASIC4.56□□□□□ -1.68
SHFQ7M4L6 AC016877.3-201ENST00000606778 504 ntBASIC4.56□□□□□ -1.68
SHFQ7M4L6 AC007349.4-201ENST00000608114 532 ntBASIC4.56□□□□□ -1.68
SHFQ7M4L6 AC097065.2-201ENST00000608159 533 ntBASIC4.56□□□□□ -1.68
SHFQ7M4L6 AL445423.1-201ENST00000609941 536 ntBASIC4.56□□□□□ -1.68
SHFQ7M4L6 uc_338.9-201ENST00000617424 182 ntBASIC4.56□□□□□ -1.68
SHFQ7M4L6 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC4.56□□□□□ -1.68
SHFQ7M4L6 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.56□□□□□ -1.68
SHFQ7M4L6 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SHFQ7M4L6 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SHFQ7M4L6 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
SHFQ7M4L6 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SHFQ7M4L6 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC4.56□□□□□ -1.68
SHFQ7M4L6 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
SHFQ7M4L6 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
SHFQ7M4L6 AL672167.1-203ENST00000641299 2975 ntBASIC4.56□□□□□ -1.68
SHFQ7M4L6 ZNF876P-202ENST00000398732 1485 ntBASIC4.56□□□□□ -1.68
SHFQ7M4L6 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.55□□□□□ -1.68
SHFQ7M4L6 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SHFQ7M4L6 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
SHFQ7M4L6 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.55□□□□□ -1.68
SHFQ7M4L6 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SHFQ7M4L6 CASC19-204ENST00000641001 2055 ntBASIC4.55□□□□□ -1.68
SHFQ7M4L6 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
SHFQ7M4L6 MTCO1P6-201ENST00000481192 1384 ntBASIC4.55□□□□□ -1.68
SHFQ7M4L6 AC005261.4-201ENST00000600047 1385 ntBASIC4.55□□□□□ -1.68
SHFQ7M4L6 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.55□□□□□ -1.68
SHFQ7M4L6 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC4.55□□□□□ -1.68
SHFQ7M4L6 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SHFQ7M4L6 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.55□□□□□ -1.68
SHFQ7M4L6 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
SHFQ7M4L6 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.55□□□□□ -1.68
SHFQ7M4L6 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.55□□□□□ -1.68
SHFQ7M4L6 TMSB4XP4-201ENST00000323496 618 ntBASIC4.55□□□□□ -1.68
SHFQ7M4L6 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SHFQ7M4L6 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
SHFQ7M4L6 RN7SKP113-201ENST00000363891 295 ntBASIC4.55□□□□□ -1.68
SHFQ7M4L6 SNORA2.3-201ENST00000383920 135 ntBASIC4.55□□□□□ -1.68
SHFQ7M4L6 RNA5SP339-201ENST00000390987 122 ntBASIC4.55□□□□□ -1.68
SHFQ7M4L6 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.55□□□□□ -1.68
SHFQ7M4L6 NUDT19P3-201ENST00000404698 555 ntBASIC4.55□□□□□ -1.68
SHFQ7M4L6 RN7SKP278-201ENST00000410504 342 ntBASIC4.55□□□□□ -1.68
SHFQ7M4L6 OR4K6P-201ENST00000416478 897 ntBASIC4.55□□□□□ -1.68
SHFQ7M4L6 Z75741.2-201ENST00000417272 1167 ntBASIC4.55□□□□□ -1.68
SHFQ7M4L6 AP001324.1-201ENST00000428553 399 ntBASIC4.55□□□□□ -1.68
SHFQ7M4L6 CYCSP6-201ENST00000434498 302 ntBASIC4.55□□□□□ -1.68
SHFQ7M4L6 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
SHFQ7M4L6 AC234064.1-201ENST00000436312 247 ntBASIC4.55□□□□□ -1.68
SHFQ7M4L6 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.55□□□□□ -1.68
SHFQ7M4L6 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SHFQ7M4L6 PCNPP2-201ENST00000441651 455 ntBASIC4.55□□□□□ -1.68
SHFQ7M4L6 AL161636.2-201ENST00000445179 927 ntBASIC4.55□□□□□ -1.68
SHFQ7M4L6 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SHFQ7M4L6 PTENP1-201ENST00000447117 1215 ntBASIC4.55□□□□□ -1.68
SHFQ7M4L6 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.55□□□□□ -1.68
SHFQ7M4L6 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.55□□□□□ -1.68
SHFQ7M4L6 NPM1P13-201ENST00000452663 865 ntBASIC4.55□□□□□ -1.68
SHFQ7M4L6 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC4.55□□□□□ -1.68
SHFQ7M4L6 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
SHFQ7M4L6 RPL7P6-201ENST00000480903 738 ntBASIC4.55□□□□□ -1.68
SHFQ7M4L6 AC090686.1-201ENST00000481577 749 ntBASIC4.55□□□□□ -1.68
SHFQ7M4L6 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SHFQ7M4L6 RN7SL441P-201ENST00000492388 296 ntBASIC4.55□□□□□ -1.68
SHFQ7M4L6 RN7SL466P-201ENST00000497546 295 ntBASIC4.55□□□□□ -1.68
SHFQ7M4L6 AC091951.3-201ENST00000504093 246 ntBASIC4.55□□□□□ -1.68
SHFQ7M4L6 RPS4XP20-201ENST00000505751 772 ntBASIC4.55□□□□□ -1.68
SHFQ7M4L6 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.55□□□□□ -1.68
SHFQ7M4L6 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.55□□□□□ -1.68
SHFQ7M4L6 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.55□□□□□ -1.68
SHFQ7M4L6 RNA5SP249-201ENST00000516127 99 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms