Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 RN7SKP78-201ENST00000364711 318 ntBASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 AL078604.1-201ENST00000404609 466 ntBASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 HNRNPDP2-201ENST00000406475 478 ntBASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 MIR1284-201ENST00000408337 120 ntBASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 AL354890.1-201ENST00000413730 346 ntBASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 AC062016.2-201ENST00000420950 676 ntBASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 RPS3P2-201ENST00000421346 701 ntBASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 B3GNT2P1-201ENST00000434960 952 ntBASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 YWHAZP8-201ENST00000436935 731 ntBASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 EEF1A1P1-201ENST00000447052 739 ntBASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 MTND2P19-201ENST00000449129 1012 ntBASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 FRG2FP-204ENST00000453982 852 ntBASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 MTCO3P11-201ENST00000455103 774 ntBASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 AC093166.4-201ENST00000457867 318 ntBASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 RN7SL188P-201ENST00000469842 285 ntBASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 RPL5P22-201ENST00000480199 884 ntBASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 HMGB1P28-201ENST00000507778 552 ntBASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 HMGB1P44-201ENST00000508597 572 ntBASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 RNY4P37-201ENST00000516225 96 ntBASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 ARL2BPP5-201ENST00000523141 481 ntBASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 SLC2A13P1-201ENST00000531560 322 ntBASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 AC126615.2-201ENST00000553003 515 ntBASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 EIF5A2P1-201ENST00000564027 460 ntBASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 AL512347.1-201ENST00000566420 503 ntBASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 AC091946.2-201ENST00000606105 291 ntBASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 AC008083.4-201ENST00000615076 444 ntBASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 AC091965.5-201ENST00000624785 342 ntBASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 AC087565.3-203ENST00000641018 837 ntBASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 AC011477.1-204ENST00000623416 1325 ntBASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
CCDC144NLQ6NUI1 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC144NLQ6NUI1 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC144NLQ6NUI1 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.65□□□□□ -1.66
CCDC144NLQ6NUI1 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
CCDC144NLQ6NUI1 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
CCDC144NLQ6NUI1 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC144NLQ6NUI1 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC144NLQ6NUI1 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
CCDC144NLQ6NUI1 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.65□□□□□ -1.66
CCDC144NLQ6NUI1 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC4.65□□□□□ -1.66
CCDC144NLQ6NUI1 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC144NLQ6NUI1 AL390862.1-201ENST00000635467 1469 ntBASIC4.65□□□□□ -1.66
CCDC144NLQ6NUI1 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CCDC144NLQ6NUI1 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CCDC144NLQ6NUI1 RNU6-216P-201ENST00000363282 104 ntBASIC4.65□□□□□ -1.67
CCDC144NLQ6NUI1 RNA5SP500-201ENST00000364486 119 ntBASIC4.65□□□□□ -1.67
CCDC144NLQ6NUI1 ATP5F1P4-201ENST00000397288 746 ntBASIC4.65□□□□□ -1.67
CCDC144NLQ6NUI1 AL031577.2-201ENST00000404133 280 ntBASIC4.65□□□□□ -1.67
CCDC144NLQ6NUI1 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
CCDC144NLQ6NUI1 PIGPP2-201ENST00000411569 458 ntBASIC4.65□□□□□ -1.67
CCDC144NLQ6NUI1 AC211486.3-201ENST00000412694 621 ntBASIC4.65□□□□□ -1.67
CCDC144NLQ6NUI1 MRPL53P1-201ENST00000414323 319 ntBASIC4.65□□□□□ -1.67
CCDC144NLQ6NUI1 SDHDP6-201ENST00000414693 480 ntBASIC4.65□□□□□ -1.67
CCDC144NLQ6NUI1 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC4.65□□□□□ -1.67
CCDC144NLQ6NUI1 RPL34P3-201ENST00000421454 338 ntBASIC4.65□□□□□ -1.67
CCDC144NLQ6NUI1 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms