Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC7.79□□□□□ -1.16
RC3H1Q5TC82 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC7.79□□□□□ -1.16
RC3H1Q5TC82 AC004817.2-201ENST00000561794 651 ntBASIC7.79□□□□□ -1.16
RC3H1Q5TC82 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC7.79□□□□□ -1.16
RC3H1Q5TC82 AC015818.6-201ENST00000584274 634 ntBASIC7.79□□□□□ -1.16
RC3H1Q5TC82 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
RC3H1Q5TC82 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
RC3H1Q5TC82 AC010401.2-201ENST00000575137 4934 ntBASIC7.79□□□□□ -1.16
RC3H1Q5TC82 AC073342.2-201ENST00000595842 1800 ntBASIC7.79□□□□□ -1.16
RC3H1Q5TC82 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
RC3H1Q5TC82 MAPK10-261ENST00000641050 3109 ntBASIC7.79□□□□□ -1.16
RC3H1Q5TC82 Z83820.1-201ENST00000456978 1499 ntBASIC7.79□□□□□ -1.16
RC3H1Q5TC82 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
RC3H1Q5TC82 AC105114.1-201ENST00000624795 1862 ntBASIC7.79□□□□□ -1.16
RC3H1Q5TC82 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
RC3H1Q5TC82 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
RC3H1Q5TC82 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
RC3H1Q5TC82 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC7.78□□□□□ -1.16
RC3H1Q5TC82 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RC3H1Q5TC82 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RC3H1Q5TC82 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
RC3H1Q5TC82 AL118496.1-201ENST00000440201 1812 ntBASIC7.78□□□□□ -1.16
RC3H1Q5TC82 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC7.78□□□□□ -1.16
RC3H1Q5TC82 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC7.78□□□□□ -1.16
RC3H1Q5TC82 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RC3H1Q5TC82 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC7.78□□□□□ -1.16
RC3H1Q5TC82 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RC3H1Q5TC82 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RC3H1Q5TC82 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RC3H1Q5TC82 RNY3P3-201ENST00000363816 102 ntBASIC7.78□□□□□ -1.16
RC3H1Q5TC82 RNA5SP478-201ENST00000364657 115 ntBASIC7.78□□□□□ -1.16
RC3H1Q5TC82 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RC3H1Q5TC82 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RC3H1Q5TC82 AL356057.3-201ENST00000402607 340 ntBASIC7.78□□□□□ -1.16
RC3H1Q5TC82 NACAP7-201ENST00000407371 609 ntBASIC7.78□□□□□ -1.16
RC3H1Q5TC82 RNU2-62P-201ENST00000410868 191 ntBASIC7.78□□□□□ -1.16
RC3H1Q5TC82 RN7SKP140-201ENST00000411196 284 ntBASIC7.78□□□□□ -1.16
RC3H1Q5TC82 RNU4-61P-201ENST00000411243 107 ntBASIC7.78□□□□□ -1.16
RC3H1Q5TC82 EIF1P3-201ENST00000423841 334 ntBASIC7.78□□□□□ -1.16
RC3H1Q5TC82 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC7.78□□□□□ -1.16
RC3H1Q5TC82 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC7.78□□□□□ -1.16
RC3H1Q5TC82 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC7.78□□□□□ -1.16
RC3H1Q5TC82 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC7.78□□□□□ -1.16
RC3H1Q5TC82 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC7.78□□□□□ -1.16
RC3H1Q5TC82 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC7.78□□□□□ -1.16
RC3H1Q5TC82 MTCO2P29-201ENST00000465212 189 ntBASIC7.78□□□□□ -1.16
RC3H1Q5TC82 AC090096.1-201ENST00000489168 390 ntBASIC7.78□□□□□ -1.16
RC3H1Q5TC82 DYNLL1P6-201ENST00000503440 264 ntBASIC7.78□□□□□ -1.16
RC3H1Q5TC82 SNX5P1-201ENST00000505757 1041 ntBASIC7.78□□□□□ -1.16
RC3H1Q5TC82 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC7.78□□□□□ -1.16
RC3H1Q5TC82 AC093809.1-201ENST00000509155 340 ntBASIC7.78□□□□□ -1.16
RC3H1Q5TC82 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC7.78□□□□□ -1.16
RC3H1Q5TC82 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC7.78□□□□□ -1.16
RC3H1Q5TC82 SNORA70.20-201ENST00000516848 126 ntBASIC7.78□□□□□ -1.16
RC3H1Q5TC82 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC7.78□□□□□ -1.16
RC3H1Q5TC82 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC7.78□□□□□ -1.16
RC3H1Q5TC82 AC239860.2-201ENST00000525886 270 ntBASIC7.78□□□□□ -1.16
RC3H1Q5TC82 AP003034.1-201ENST00000534621 422 ntBASIC7.78□□□□□ -1.16
RC3H1Q5TC82 DNAJC8P1-201ENST00000554535 372 ntBASIC7.78□□□□□ -1.16
RC3H1Q5TC82 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC7.78□□□□□ -1.16
RC3H1Q5TC82 MIR1273E-201ENST00000581165 102 ntBASIC7.78□□□□□ -1.16
RC3H1Q5TC82 AC012507.3-201ENST00000603556 477 ntBASIC7.78□□□□□ -1.16
RC3H1Q5TC82 AC004890.3-201ENST00000605566 1095 ntBASIC7.78□□□□□ -1.16
RC3H1Q5TC82 RMST_3.1-201ENST00000611651 109 ntBASIC7.78□□□□□ -1.16
RC3H1Q5TC82 AC139792.3-201ENST00000623525 224 ntBASIC7.78□□□□□ -1.16
RC3H1Q5TC82 TPTEP1-208ENST00000636884 213 ntBASIC7.78□□□□□ -1.16
RC3H1Q5TC82 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RC3H1Q5TC82 ZNF37BP-203ENST00000452306 1352 ntBASIC7.78□□□□□ -1.16
RC3H1Q5TC82 AC138915.4-201ENST00000565549 4147 ntBASIC7.78□□□□□ -1.16
RC3H1Q5TC82 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RC3H1Q5TC82 AC100871.1-201ENST00000507871 1456 ntBASIC7.78□□□□□ -1.16
RC3H1Q5TC82 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RC3H1Q5TC82 AC091046.3-201ENST00000631455 1574 ntBASIC7.78□□□□□ -1.16
RC3H1Q5TC82 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
RC3H1Q5TC82 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC7.78□□□□□ -1.16
RC3H1Q5TC82 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
RC3H1Q5TC82 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC7.78□□□□□ -1.16
RC3H1Q5TC82 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
RC3H1Q5TC82 BDNF-AS-201ENST00000499008 2324 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RC3H1Q5TC82 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC7.78□□□□□ -1.16
RC3H1Q5TC82 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
RC3H1Q5TC82 CYP1D1P-201ENST00000416662 1433 ntBASIC7.78□□□□□ -1.16
RC3H1Q5TC82 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
RC3H1Q5TC82 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC7.77□□□□□ -1.17
RC3H1Q5TC82 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
RC3H1Q5TC82 SALL4P7-201ENST00000555779 3120 ntBASIC7.77□□□□□ -1.17
RC3H1Q5TC82 AC119674.1-202ENST00000641333 1860 ntBASIC7.77□□□□□ -1.17
RC3H1Q5TC82 OR9K1P-201ENST00000326513 941 ntBASIC7.77□□□□□ -1.17
RC3H1Q5TC82 SNORA64.1-201ENST00000362600 132 ntBASIC7.77□□□□□ -1.17
RC3H1Q5TC82 RN7SKP128-201ENST00000364270 303 ntBASIC7.77□□□□□ -1.17
RC3H1Q5TC82 RNU105B-201ENST00000364478 208 ntBASIC7.77□□□□□ -1.17
RC3H1Q5TC82 RNA5SP500-201ENST00000364486 119 ntBASIC7.77□□□□□ -1.17
RC3H1Q5TC82 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
RC3H1Q5TC82 RN7SKP32-201ENST00000410167 303 ntBASIC7.77□□□□□ -1.17
RC3H1Q5TC82 RNU2-47P-201ENST00000410649 186 ntBASIC7.77□□□□□ -1.17
RC3H1Q5TC82 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC7.77□□□□□ -1.17
RC3H1Q5TC82 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
RC3H1Q5TC82 AC127526.2-201ENST00000426436 775 ntBASIC7.77□□□□□ -1.17
RC3H1Q5TC82 FO393419.3-201ENST00000428741 282 ntBASIC7.77□□□□□ -1.17
RC3H1Q5TC82 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC7.77□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms