Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.79□□□□□ -1.8
USF2Q15853 AC013244.1-201ENST00000604279 193 ntBASIC3.79□□□□□ -1.8
USF2Q15853 AC087783.2-201ENST00000605070 562 ntBASIC3.79□□□□□ -1.8
USF2Q15853 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC3.79□□□□□ -1.8
USF2Q15853 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC3.79□□□□□ -1.8
USF2Q15853 SDR42E1P1-201ENST00000611327 477 ntBASIC3.79□□□□□ -1.8
USF2Q15853 AL627230.1-201ENST00000613077 211 ntBASIC3.79□□□□□ -1.8
USF2Q15853 AL512624.1-201ENST00000613638 469 ntBASIC3.79□□□□□ -1.8
USF2Q15853 AL591926.8-201ENST00000616876 211 ntBASIC3.79□□□□□ -1.8
USF2Q15853 MIR7154-201ENST00000620673 73 ntBASIC3.79□□□□□ -1.8
USF2Q15853 TEX41-254ENST00000626394 423 ntTSL 5 BASIC3.79□□□□□ -1.8
USF2Q15853 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
USF2Q15853 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
USF2Q15853 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
USF2Q15853 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
USF2Q15853 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
USF2Q15853 EEF1A1P36-201ENST00000427807 1351 ntBASIC3.78□□□□□ -1.8
USF2Q15853 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
USF2Q15853 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.78□□□□□ -1.8
USF2Q15853 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
USF2Q15853 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC3.78□□□□□ -1.8
USF2Q15853 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC3.78□□□□□ -1.8
USF2Q15853 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.78□□□□□ -1.8
USF2Q15853 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
USF2Q15853 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
USF2Q15853 AC008549.2-201ENST00000333482 706 ntBASIC3.78□□□□□ -1.8
USF2Q15853 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
USF2Q15853 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC3.78□□□□□ -1.8
USF2Q15853 U3.36-201ENST00000408418 213 ntBASIC3.78□□□□□ -1.8
USF2Q15853 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC3.78□□□□□ -1.8
USF2Q15853 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
USF2Q15853 RGS17P1-201ENST00000423358 553 ntBASIC3.78□□□□□ -1.8
USF2Q15853 OR2B7P-201ENST00000429302 934 ntBASIC3.78□□□□□ -1.8
USF2Q15853 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.78□□□□□ -1.8
USF2Q15853 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.78□□□□□ -1.8
USF2Q15853 RHOT1P3-201ENST00000436571 331 ntBASIC3.78□□□□□ -1.8
USF2Q15853 AC105402.2-201ENST00000438503 358 ntBASIC3.78□□□□□ -1.8
USF2Q15853 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC3.78□□□□□ -1.8
USF2Q15853 AURKAPS1-201ENST00000451805 1212 ntBASIC3.78□□□□□ -1.8
USF2Q15853 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.78□□□□□ -1.8
USF2Q15853 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC3.78□□□□□ -1.8
USF2Q15853 RN7SL222P-201ENST00000476452 299 ntBASIC3.78□□□□□ -1.8
USF2Q15853 RPS18P6-201ENST00000476880 458 ntBASIC3.78□□□□□ -1.8
USF2Q15853 AC008638.1-201ENST00000506035 866 ntBASIC3.78□□□□□ -1.8
USF2Q15853 PPBPP1-201ENST00000510807 373 ntBASIC3.78□□□□□ -1.8
USF2Q15853 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC3.78□□□□□ -1.8
USF2Q15853 HNRNPKP5-201ENST00000515300 253 ntBASIC3.78□□□□□ -1.8
USF2Q15853 RNA5SP34-201ENST00000516887 130 ntBASIC3.78□□□□□ -1.8
USF2Q15853 Y_RNA.719-201ENST00000517156 106 ntBASIC3.78□□□□□ -1.8
USF2Q15853 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC3.78□□□□□ -1.8
USF2Q15853 IGKV2D-23-201ENST00000518179 286 ntBASIC3.78□□□□□ -1.8
USF2Q15853 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.78□□□□□ -1.8
USF2Q15853 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC3.78□□□□□ -1.8
USF2Q15853 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC3.78□□□□□ -1.8
USF2Q15853 AC069240.1-201ENST00000548774 375 ntBASIC3.78□□□□□ -1.8
USF2Q15853 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC3.78□□□□□ -1.8
USF2Q15853 TVP23CP2-201ENST00000571473 623 ntBASIC3.78□□□□□ -1.8
USF2Q15853 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC3.78□□□□□ -1.8
USF2Q15853 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC3.78□□□□□ -1.8
USF2Q15853 AC011447.4-201ENST00000587562 111 ntBASIC3.78□□□□□ -1.8
USF2Q15853 SLC25A36P1-201ENST00000590111 465 ntBASIC3.78□□□□□ -1.8
USF2Q15853 AC138473.1-201ENST00000605717 526 ntBASIC3.78□□□□□ -1.8
USF2Q15853 AC011472.4-201ENST00000615848 491 ntBASIC3.78□□□□□ -1.8
USF2Q15853 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC3.78□□□□□ -1.8
USF2Q15853 PABPC1P6-201ENST00000445594 1829 ntBASIC3.78□□□□□ -1.8
USF2Q15853 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
USF2Q15853 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
USF2Q15853 AL136164.3-201ENST00000624429 3978 ntBASIC3.78□□□□□ -1.8
USF2Q15853 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.78□□□□□ -1.8
USF2Q15853 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
USF2Q15853 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
USF2Q15853 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.78□□□□□ -1.81
USF2Q15853 AC083899.2-201ENST00000423285 1376 ntBASIC3.77□□□□□ -1.81
USF2Q15853 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
USF2Q15853 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
USF2Q15853 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
USF2Q15853 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
USF2Q15853 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.77□□□□□ -1.81
USF2Q15853 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
USF2Q15853 OR4K17-201ENST00000315543 1032 ntBASIC3.77□□□□□ -1.81
USF2Q15853 RNA5SP455-201ENST00000365190 119 ntBASIC3.77□□□□□ -1.81
USF2Q15853 MIR223-201ENST00000385204 110 ntBASIC3.77□□□□□ -1.81
USF2Q15853 MIR513A2-201ENST00000385249 127 ntBASIC3.77□□□□□ -1.81
USF2Q15853 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
USF2Q15853 RPS27AP11-201ENST00000402798 447 ntBASIC3.77□□□□□ -1.81
USF2Q15853 AL357515.1-201ENST00000402967 542 ntBASIC3.77□□□□□ -1.81
USF2Q15853 ZNF603P-201ENST00000405613 487 ntBASIC3.77□□□□□ -1.81
USF2Q15853 AMD1P2-201ENST00000412936 992 ntBASIC3.77□□□□□ -1.81
USF2Q15853 AF186996.5-201ENST00000418098 904 ntBASIC3.77□□□□□ -1.81
USF2Q15853 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC3.77□□□□□ -1.81
USF2Q15853 MTCYBP21-201ENST00000443300 1113 ntBASIC3.77□□□□□ -1.81
USF2Q15853 AL137845.2-201ENST00000444292 988 ntBASIC3.77□□□□□ -1.81
USF2Q15853 HMGB1P16-201ENST00000447155 540 ntBASIC3.77□□□□□ -1.81
USF2Q15853 AC000111.2-201ENST00000448200 210 ntBASIC3.77□□□□□ -1.81
USF2Q15853 CEACAMP6-201ENST00000452007 574 ntBASIC3.77□□□□□ -1.81
USF2Q15853 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC3.77□□□□□ -1.81
USF2Q15853 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC3.77□□□□□ -1.81
USF2Q15853 HMGN2P7-201ENST00000456186 273 ntBASIC3.77□□□□□ -1.81
USF2Q15853 TSACC-207ENST00000470342 601 ntTSL 2 BASIC3.77□□□□□ -1.81
USF2Q15853 RPL21P103-201ENST00000479921 488 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms