Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC2.49□□□□□ -2.01
HSPG2P98160 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC2.49□□□□□ -2.01
HSPG2P98160 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC2.49□□□□□ -2.01
HSPG2P98160 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.49□□□□□ -2.01
HSPG2P98160 ATE1-AS1-202ENST00000636460 506 ntBASIC2.49□□□□□ -2.01
HSPG2P98160 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
HSPG2P98160 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
HSPG2P98160 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HSPG2P98160 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC2.49□□□□□ -2.01
HSPG2P98160 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
HSPG2P98160 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HSPG2P98160 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HSPG2P98160 TTC3P1-201ENST00000399586 6081 ntBASIC2.49□□□□□ -2.01
HSPG2P98160 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
HSPG2P98160 AP000473.2-201ENST00000602659 1537 ntBASIC2.49□□□□□ -2.01
HSPG2P98160 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
HSPG2P98160 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
HSPG2P98160 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
HSPG2P98160 MAP1LC3BP1-201ENST00000417653 379 ntBASIC2.49□□□□□ -2.01
HSPG2P98160 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC2.49□□□□□ -2.01
HSPG2P98160 AC073387.1-201ENST00000453261 709 ntBASIC2.49□□□□□ -2.01
HSPG2P98160 MIR4433B-201ENST00000581329 102 ntBASIC2.49□□□□□ -2.01
HSPG2P98160 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
HSPG2P98160 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC2.49□□□□□ -2.01
HSPG2P98160 CCDC162P-202ENST00000368966 6751 ntBASIC2.49□□□□□ -2.01
HSPG2P98160 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC2.49□□□□□ -2.01
HSPG2P98160 BDP1P-201ENST00000582658 1990 ntBASIC2.49□□□□□ -2.01
HSPG2P98160 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
HSPG2P98160 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HSPG2P98160 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
HSPG2P98160 AL133383.2-201ENST00000622958 2336 ntBASIC2.49□□□□□ -2.01
HSPG2P98160 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HSPG2P98160 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
HSPG2P98160 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
HSPG2P98160 SNORA80A-201ENST00000363922 136 ntBASIC2.49□□□□□ -2.01
HSPG2P98160 BMS1P3-201ENST00000372011 932 ntBASIC2.49□□□□□ -2.01
HSPG2P98160 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC2.49□□□□□ -2.01
HSPG2P98160 AL160175.1-201ENST00000428124 247 ntBASIC2.49□□□□□ -2.01
HSPG2P98160 AC097713.2-201ENST00000430199 356 ntBASIC2.49□□□□□ -2.01
HSPG2P98160 AC004938.1-201ENST00000438468 308 ntBASIC2.49□□□□□ -2.01
HSPG2P98160 CYCSP24-201ENST00000445119 316 ntBASIC2.49□□□□□ -2.01
HSPG2P98160 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC2.49□□□□□ -2.01
HSPG2P98160 APOOP2-201ENST00000461561 539 ntBASIC2.49□□□□□ -2.01
HSPG2P98160 RN7SL271P-201ENST00000487601 295 ntBASIC2.49□□□□□ -2.01
HSPG2P98160 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC2.49□□□□□ -2.01
HSPG2P98160 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HSPG2P98160 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC2.49□□□□□ -2.01
HSPG2P98160 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HSPG2P98160 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
HSPG2P98160 AC058791.1-201ENST00000608412 3198 ntBASIC2.49□□□□□ -2.01
HSPG2P98160 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
HSPG2P98160 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.49□□□□□ -2.01
HSPG2P98160 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC2.49□□□□□ -2.01
HSPG2P98160 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
HSPG2P98160 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC2.49□□□□□ -2.01
HSPG2P98160 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
HSPG2P98160 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
HSPG2P98160 AC010168.2-201ENST00000562691 5428 ntBASIC2.49□□□□□ -2.01
HSPG2P98160 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC2.49□□□□□ -2.01
HSPG2P98160 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC2.49□□□□□ -2.01
HSPG2P98160 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC2.49□□□□□ -2.01
HSPG2P98160 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC2.49□□□□□ -2.01
HSPG2P98160 EI24P3-201ENST00000399046 1062 ntBASIC2.49□□□□□ -2.01
HSPG2P98160 MTND2P15-201ENST00000418575 892 ntBASIC2.49□□□□□ -2.01
HSPG2P98160 RNF19BPX-201ENST00000426224 625 ntBASIC2.49□□□□□ -2.01
HSPG2P98160 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC2.49□□□□□ -2.01
HSPG2P98160 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC2.49□□□□□ -2.01
HSPG2P98160 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC2.49□□□□□ -2.01
HSPG2P98160 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC2.49□□□□□ -2.01
HSPG2P98160 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC2.49□□□□□ -2.01
HSPG2P98160 AC091167.4-201ENST00000605079 184 ntBASIC2.49□□□□□ -2.01
HSPG2P98160 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC2.49□□□□□ -2.01
HSPG2P98160 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
HSPG2P98160 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
HSPG2P98160 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
HSPG2P98160 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
HSPG2P98160 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
HSPG2P98160 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC2.48□□□□□ -2.01
HSPG2P98160 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
HSPG2P98160 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
HSPG2P98160 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
HSPG2P98160 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
HSPG2P98160 HMGB3P19-201ENST00000403971 560 ntBASIC2.48□□□□□ -2.01
HSPG2P98160 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC2.48□□□□□ -2.01
HSPG2P98160 AC096576.1-201ENST00000489014 359 ntBASIC2.48□□□□□ -2.01
HSPG2P98160 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC2.48□□□□□ -2.01
HSPG2P98160 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC2.48□□□□□ -2.01
HSPG2P98160 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
HSPG2P98160 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
HSPG2P98160 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC2.48□□□□□ -2.01
HSPG2P98160 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
HSPG2P98160 LINC00561-201ENST00000565815 2738 ntBASIC2.48□□□□□ -2.01
HSPG2P98160 VPS13A-203ENST00000360280 15320 ntAPPRIS P4 TSL 1 (best) BASIC2.48□□□□□ -2.01
HSPG2P98160 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC2.48□□□□□ -2.01
HSPG2P98160 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
HSPG2P98160 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC2.48□□□□□ -2.01
HSPG2P98160 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
HSPG2P98160 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC2.48□□□□□ -2.01
HSPG2P98160 LSM3P2-201ENST00000551246 273 ntBASIC2.48□□□□□ -2.01
HSPG2P98160 AC124068.1-201ENST00000563131 678 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms