Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 RNU6-666P-201ENST00000363499 107 ntBASIC3.96□□□□□ -1.78
LMO4P61968 SNORD113.2-201ENST00000364166 89 ntBASIC3.96□□□□□ -1.78
LMO4P61968 RNU4-27P-201ENST00000410889 139 ntBASIC3.96□□□□□ -1.78
LMO4P61968 RAB28P1-201ENST00000411517 641 ntBASIC3.96□□□□□ -1.78
LMO4P61968 ATG4AP1-201ENST00000416893 538 ntBASIC3.96□□□□□ -1.78
LMO4P61968 ARL2BPP3-201ENST00000421226 480 ntBASIC3.96□□□□□ -1.78
LMO4P61968 RPS27AP7-201ENST00000422792 455 ntBASIC3.96□□□□□ -1.78
LMO4P61968 OR5M12P-201ENST00000423388 929 ntBASIC3.96□□□□□ -1.78
LMO4P61968 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.96□□□□□ -1.78
LMO4P61968 AC016712.1-201ENST00000431088 378 ntBASIC3.96□□□□□ -1.78
LMO4P61968 AL451139.1-201ENST00000434718 346 ntBASIC3.96□□□□□ -1.78
LMO4P61968 SETD6P1-201ENST00000444575 317 ntBASIC3.96□□□□□ -1.78
LMO4P61968 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.96□□□□□ -1.78
LMO4P61968 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.96□□□□□ -1.78
LMO4P61968 CYCSP42-201ENST00000450823 238 ntBASIC3.96□□□□□ -1.78
LMO4P61968 AC002553.2-201ENST00000453217 340 ntBASIC3.96□□□□□ -1.78
LMO4P61968 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC3.96□□□□□ -1.78
LMO4P61968 NDUFA5P9-201ENST00000472609 340 ntBASIC3.96□□□□□ -1.78
LMO4P61968 SNRPCP3-201ENST00000474888 476 ntBASIC3.96□□□□□ -1.78
LMO4P61968 HMGB1P38-201ENST00000490557 577 ntBASIC3.96□□□□□ -1.78
LMO4P61968 AP000563.1-201ENST00000490865 758 ntBASIC3.96□□□□□ -1.78
LMO4P61968 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.96□□□□□ -1.78
LMO4P61968 SUMO1P1-201ENST00000497904 306 ntBASIC3.96□□□□□ -1.78
LMO4P61968 PPM1AP1-201ENST00000502740 1135 ntBASIC3.96□□□□□ -1.78
LMO4P61968 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC3.96□□□□□ -1.78
LMO4P61968 AC121161.1-201ENST00000510606 652 ntBASIC3.96□□□□□ -1.78
LMO4P61968 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.96□□□□□ -1.78
LMO4P61968 snoU109.6-201ENST00000516831 118 ntBASIC3.96□□□□□ -1.78
LMO4P61968 RNU6-709P-201ENST00000517257 104 ntBASIC3.96□□□□□ -1.78
LMO4P61968 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.96□□□□□ -1.78
LMO4P61968 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC3.96□□□□□ -1.78
LMO4P61968 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.96□□□□□ -1.78
LMO4P61968 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC3.96□□□□□ -1.78
LMO4P61968 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.96□□□□□ -1.78
LMO4P61968 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.96□□□□□ -1.78
LMO4P61968 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.96□□□□□ -1.78
LMO4P61968 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.96□□□□□ -1.78
LMO4P61968 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.96□□□□□ -1.78
LMO4P61968 AC006349.1-201ENST00000555526 235 ntBASIC3.96□□□□□ -1.78
LMO4P61968 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC3.96□□□□□ -1.78
LMO4P61968 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC3.96□□□□□ -1.78
LMO4P61968 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC3.96□□□□□ -1.78
LMO4P61968 AC145350.1-201ENST00000567426 208 ntBASIC3.96□□□□□ -1.78
LMO4P61968 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC3.96□□□□□ -1.78
LMO4P61968 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.96□□□□□ -1.78
LMO4P61968 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.96□□□□□ -1.78
LMO4P61968 AL160237.3-201ENST00000604114 1013 ntBASIC3.96□□□□□ -1.78
LMO4P61968 AC124016.2-201ENST00000610058 665 ntBASIC3.96□□□□□ -1.78
LMO4P61968 RNU6-1192P-201ENST00000612197 107 ntBASIC3.96□□□□□ -1.78
LMO4P61968 AL122125.1-201ENST00000616999 600 ntBASIC3.96□□□□□ -1.78
LMO4P61968 RNU6-489P-201ENST00000618289 107 ntBASIC3.96□□□□□ -1.78
LMO4P61968 AL512427.1-201ENST00000618593 349 ntBASIC3.96□□□□□ -1.78
LMO4P61968 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.96□□□□□ -1.78
LMO4P61968 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.96□□□□□ -1.78
LMO4P61968 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.96□□□□□ -1.78
LMO4P61968 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC3.96□□□□□ -1.78
LMO4P61968 AC112198.2-201ENST00000426589 6996 ntBASIC3.96□□□□□ -1.78
LMO4P61968 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
LMO4P61968 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC3.96□□□□□ -1.78
LMO4P61968 AC025574.1-201ENST00000554784 1653 ntBASIC3.96□□□□□ -1.78
LMO4P61968 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.96□□□□□ -1.78
LMO4P61968 AC093671.1-201ENST00000624981 2929 ntBASIC3.96□□□□□ -1.78
LMO4P61968 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC3.96□□□□□ -1.78
LMO4P61968 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
LMO4P61968 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
LMO4P61968 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LMO4P61968 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.95□□□□□ -1.78
LMO4P61968 AL359715.4-201ENST00000606629 1436 ntBASIC3.95□□□□□ -1.78
LMO4P61968 MFSD8-220ENST00000641243 1422 ntBASIC3.95□□□□□ -1.78
LMO4P61968 KARSP3-201ENST00000571212 1504 ntBASIC3.95□□□□□ -1.78
LMO4P61968 SAMMSON-213ENST00000641336 1521 ntBASIC3.95□□□□□ -1.78
LMO4P61968 AC002525.1-201ENST00000624392 1622 ntBASIC3.95□□□□□ -1.78
LMO4P61968 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC3.95□□□□□ -1.78
LMO4P61968 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC3.95□□□□□ -1.78
LMO4P61968 AC004817.4-201ENST00000602396 3625 ntBASIC3.95□□□□□ -1.78
LMO4P61968 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
LMO4P61968 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LMO4P61968 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
LMO4P61968 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC3.95□□□□□ -1.78
LMO4P61968 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LMO4P61968 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
LMO4P61968 AL445523.1-201ENST00000451184 1362 ntBASIC3.95□□□□□ -1.78
LMO4P61968 MAPK10-328ENST00000641553 4009 ntBASIC3.95□□□□□ -1.78
LMO4P61968 AC126755.2-208ENST00000327792 462 ntBASIC3.95□□□□□ -1.78
LMO4P61968 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LMO4P61968 AC138969.1-213ENST00000331436 462 ntBASIC3.95□□□□□ -1.78
LMO4P61968 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LMO4P61968 MIR320B1-201ENST00000390209 79 ntBASIC3.95□□□□□ -1.78
LMO4P61968 RNU1-82P-201ENST00000390851 165 ntBASIC3.95□□□□□ -1.78
LMO4P61968 ZNF602P-201ENST00000405929 924 ntBASIC3.95□□□□□ -1.78
LMO4P61968 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
LMO4P61968 MAST4-207ENST00000407621 559 ntTSL 2 BASIC3.95□□□□□ -1.78
LMO4P61968 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.95□□□□□ -1.78
LMO4P61968 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC3.95□□□□□ -1.78
LMO4P61968 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.95□□□□□ -1.78
LMO4P61968 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LMO4P61968 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC3.95□□□□□ -1.78
LMO4P61968 AL606495.1-201ENST00000422100 813 ntBASIC3.95□□□□□ -1.78
LMO4P61968 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.95□□□□□ -1.78
LMO4P61968 NANOGP5-201ENST00000424456 877 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms