Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.32□□□□□ -1.88
CMC4P56277 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.32□□□□□ -1.88
CMC4P56277 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
CMC4P56277 GSTP1P1-201ENST00000548078 319 ntBASIC3.32□□□□□ -1.88
CMC4P56277 MIR4700-201ENST00000578311 74 ntBASIC3.32□□□□□ -1.88
CMC4P56277 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.32□□□□□ -1.88
CMC4P56277 AP001160.4-201ENST00000596971 382 ntBASIC3.32□□□□□ -1.88
CMC4P56277 MIMT1-201ENST00000597105 1050 ntBASIC3.32□□□□□ -1.88
CMC4P56277 AC103792.1-201ENST00000603591 919 ntBASIC3.32□□□□□ -1.88
CMC4P56277 AC079587.1-201ENST00000603846 277 ntBASIC3.32□□□□□ -1.88
CMC4P56277 IMMP1LP1-201ENST00000605170 488 ntBASIC3.32□□□□□ -1.88
CMC4P56277 AC090948.1-201ENST00000607464 549 ntBASIC3.32□□□□□ -1.88
CMC4P56277 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.32□□□□□ -1.88
CMC4P56277 AC012409.3-201ENST00000611343 981 ntBASIC3.32□□□□□ -1.88
CMC4P56277 AC116447.1-201ENST00000613153 453 ntBASIC3.32□□□□□ -1.88
CMC4P56277 EEF1A1P42-201ENST00000613436 1331 ntBASIC3.32□□□□□ -1.88
CMC4P56277 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
CMC4P56277 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CMC4P56277 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC3.32□□□□□ -1.88
CMC4P56277 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CMC4P56277 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CMC4P56277 AC104118.1-201ENST00000607625 1589 ntBASIC3.32□□□□□ -1.88
CMC4P56277 AC009229.4-201ENST00000623854 1947 ntBASIC3.32□□□□□ -1.88
CMC4P56277 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
CMC4P56277 RAD17P1-201ENST00000418130 2042 ntBASIC3.32□□□□□ -1.88
CMC4P56277 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CMC4P56277 THAP12P5-201ENST00000405864 2275 ntBASIC3.32□□□□□ -1.88
CMC4P56277 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CMC4P56277 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CMC4P56277 LINC01109-201ENST00000603837 3081 ntBASIC3.32□□□□□ -1.88
CMC4P56277 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.32□□□□□ -1.88
CMC4P56277 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CMC4P56277 MAPK10-349ENST00000641767 3661 ntBASIC3.31□□□□□ -1.88
CMC4P56277 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CMC4P56277 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CMC4P56277 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC3.31□□□□□ -1.88
CMC4P56277 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CMC4P56277 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CMC4P56277 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CMC4P56277 OR4K17-201ENST00000315543 1032 ntBASIC3.31□□□□□ -1.88
CMC4P56277 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CMC4P56277 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CMC4P56277 RNU6-152P-201ENST00000384037 107 ntBASIC3.31□□□□□ -1.88
CMC4P56277 RPL21P108-201ENST00000413857 481 ntBASIC3.31□□□□□ -1.88
CMC4P56277 HSPE1P16-201ENST00000426640 348 ntBASIC3.31□□□□□ -1.88
CMC4P56277 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC3.31□□□□□ -1.88
CMC4P56277 CEACAMP1-201ENST00000434624 1035 ntBASIC3.31□□□□□ -1.88
CMC4P56277 PHBP16-201ENST00000446318 950 ntBASIC3.31□□□□□ -1.88
CMC4P56277 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC3.31□□□□□ -1.88
CMC4P56277 MORF4L1P4-201ENST00000450245 976 ntBASIC3.31□□□□□ -1.88
CMC4P56277 RNU6-1218P-201ENST00000458990 108 ntBASIC3.31□□□□□ -1.88
CMC4P56277 RNU6-775P-201ENST00000459318 96 ntBASIC3.31□□□□□ -1.88
CMC4P56277 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.31□□□□□ -1.88
CMC4P56277 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.31□□□□□ -1.88
CMC4P56277 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC3.31□□□□□ -1.88
CMC4P56277 IGKV2D-10-201ENST00000520194 281 ntBASIC3.31□□□□□ -1.88
CMC4P56277 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.31□□□□□ -1.88
CMC4P56277 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.31□□□□□ -1.88
CMC4P56277 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC3.31□□□□□ -1.88
CMC4P56277 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC3.31□□□□□ -1.88
CMC4P56277 MEG8-217ENST00000556637 924 ntTSL 5 BASIC3.31□□□□□ -1.88
CMC4P56277 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.31□□□□□ -1.88
CMC4P56277 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
CMC4P56277 RPL12P25-202ENST00000598100 674 ntBASIC3.31□□□□□ -1.88
CMC4P56277 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.31□□□□□ -1.88
CMC4P56277 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.31□□□□□ -1.88
CMC4P56277 AC007546.2-201ENST00000623996 360 ntBASIC3.31□□□□□ -1.88
CMC4P56277 MIR7641-1-201ENST00000627518 61 ntBASIC3.31□□□□□ -1.88
CMC4P56277 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC3.31□□□□□ -1.88
CMC4P56277 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CMC4P56277 AC025031.4-201ENST00000621248 3271 ntBASIC3.31□□□□□ -1.88
CMC4P56277 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CMC4P56277 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.31□□□□□ -1.88
CMC4P56277 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.31□□□□□ -1.88
CMC4P56277 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CMC4P56277 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.31□□□□□ -1.88
CMC4P56277 DDX18P3-201ENST00000404856 2007 ntBASIC3.31□□□□□ -1.88
CMC4P56277 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CMC4P56277 ST7-212ENST00000422922 1887 ntTSL 5 BASIC3.3□□□□□ -1.88
CMC4P56277 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CMC4P56277 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CMC4P56277 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
CMC4P56277 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC3.3□□□□□ -1.88
CMC4P56277 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC3.3□□□□□ -1.88
CMC4P56277 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC3.3□□□□□ -1.88
CMC4P56277 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.3□□□□□ -1.88
CMC4P56277 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC3.3□□□□□ -1.88
CMC4P56277 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CMC4P56277 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CMC4P56277 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CMC4P56277 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CMC4P56277 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC3.3□□□□□ -1.88
CMC4P56277 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CMC4P56277 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CMC4P56277 RNU6-304P-201ENST00000364855 107 ntBASIC3.3□□□□□ -1.88
CMC4P56277 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.3□□□□□ -1.88
CMC4P56277 RNU6-532P-201ENST00000384318 107 ntBASIC3.3□□□□□ -1.88
CMC4P56277 RNU6-31P-201ENST00000384388 108 ntBASIC3.3□□□□□ -1.88
CMC4P56277 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CMC4P56277 RNA5SP332-201ENST00000391063 115 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms