Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 RN7SL443P-201ENST00000464331 290 ntBASIC4.68□□□□□ -1.66
CDH12P55289 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.68□□□□□ -1.66
CDH12P55289 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CDH12P55289 AC104687.1-201ENST00000485829 412 ntBASIC4.68□□□□□ -1.66
CDH12P55289 RN7SL441P-201ENST00000492388 296 ntBASIC4.68□□□□□ -1.66
CDH12P55289 AC093890.1-201ENST00000502554 540 ntBASIC4.68□□□□□ -1.66
CDH12P55289 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.68□□□□□ -1.66
CDH12P55289 RNA5SP362-201ENST00000516048 118 ntBASIC4.68□□□□□ -1.66
CDH12P55289 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.68□□□□□ -1.66
CDH12P55289 AP000859.1-201ENST00000525536 307 ntBASIC4.68□□□□□ -1.66
CDH12P55289 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.68□□□□□ -1.66
CDH12P55289 AC005868.1-201ENST00000536421 331 ntBASIC4.68□□□□□ -1.66
CDH12P55289 EMP1-206ENST00000537612 505 ntTSL 3 BASIC4.68□□□□□ -1.66
CDH12P55289 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.68□□□□□ -1.66
CDH12P55289 OSBPL9P5-201ENST00000542581 171 ntBASIC4.68□□□□□ -1.66
CDH12P55289 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.68□□□□□ -1.66
CDH12P55289 DPRXP4-201ENST00000578053 568 ntBASIC4.68□□□□□ -1.66
CDH12P55289 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.68□□□□□ -1.66
CDH12P55289 AP005262.1-201ENST00000582646 997 ntBASIC4.68□□□□□ -1.66
CDH12P55289 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
CDH12P55289 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CDH12P55289 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC4.68□□□□□ -1.66
CDH12P55289 ZNF92P3-201ENST00000596594 954 ntBASIC4.68□□□□□ -1.66
CDH12P55289 AP005432.2-201ENST00000608162 586 ntBASIC4.68□□□□□ -1.66
CDH12P55289 AC079395.2-201ENST00000610982 737 ntBASIC4.68□□□□□ -1.66
CDH12P55289 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.68□□□□□ -1.66
CDH12P55289 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.68□□□□□ -1.66
CDH12P55289 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.68□□□□□ -1.66
CDH12P55289 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.68□□□□□ -1.66
CDH12P55289 AL122125.1-201ENST00000616999 600 ntBASIC4.68□□□□□ -1.66
CDH12P55289 AC139769.3-201ENST00000618383 175 ntBASIC4.68□□□□□ -1.66
CDH12P55289 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC4.68□□□□□ -1.66
CDH12P55289 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CDH12P55289 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CDH12P55289 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
CDH12P55289 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CDH12P55289 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CDH12P55289 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
CDH12P55289 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.68□□□□□ -1.66
CDH12P55289 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CDH12P55289 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDH12P55289 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDH12P55289 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CDH12P55289 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CDH12P55289 SAMMSON-213ENST00000641336 1521 ntBASIC4.67□□□□□ -1.66
CDH12P55289 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CDH12P55289 AC126323.6-202ENST00000568092 3511 ntBASIC4.67□□□□□ -1.66
CDH12P55289 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CDH12P55289 AC138393.1-206ENST00000540997 1886 ntBASIC4.67□□□□□ -1.66
CDH12P55289 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.67□□□□□ -1.66
CDH12P55289 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.67□□□□□ -1.66
CDH12P55289 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDH12P55289 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CDH12P55289 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDH12P55289 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CDH12P55289 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDH12P55289 SNORD116.1-201ENST00000365628 92 ntBASIC4.67□□□□□ -1.66
CDH12P55289 UBBP2-201ENST00000376781 231 ntBASIC4.67□□□□□ -1.66
CDH12P55289 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CDH12P55289 SNORD116-2-201ENST00000384274 95 ntBASIC4.67□□□□□ -1.66
CDH12P55289 SNORD116-6-201ENST00000384711 96 ntBASIC4.67□□□□□ -1.66
CDH12P55289 HMGB3P7-201ENST00000400214 611 ntBASIC4.67□□□□□ -1.66
CDH12P55289 MIR1271-201ENST00000408537 86 ntBASIC4.67□□□□□ -1.66
CDH12P55289 RN7SKP59-201ENST00000410520 314 ntBASIC4.67□□□□□ -1.66
CDH12P55289 RNA5SP296-201ENST00000410523 111 ntBASIC4.67□□□□□ -1.66
CDH12P55289 RPL35AP24-201ENST00000413846 330 ntBASIC4.67□□□□□ -1.66
CDH12P55289 Z75741.2-201ENST00000417272 1167 ntBASIC4.67□□□□□ -1.66
CDH12P55289 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC4.67□□□□□ -1.66
CDH12P55289 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.67□□□□□ -1.66
CDH12P55289 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.67□□□□□ -1.66
CDH12P55289 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.67□□□□□ -1.66
CDH12P55289 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.67□□□□□ -1.66
CDH12P55289 AC002542.1-201ENST00000440683 193 ntBASIC4.67□□□□□ -1.66
CDH12P55289 TXNP5-201ENST00000441043 315 ntBASIC4.67□□□□□ -1.66
CDH12P55289 PCNPP2-201ENST00000441651 455 ntBASIC4.67□□□□□ -1.66
CDH12P55289 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.67□□□□□ -1.66
CDH12P55289 OR6K5P-201ENST00000447050 945 ntBASIC4.67□□□□□ -1.66
CDH12P55289 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.67□□□□□ -1.66
CDH12P55289 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC4.67□□□□□ -1.66
CDH12P55289 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.67□□□□□ -1.66
CDH12P55289 DNAJC19P8-201ENST00000452887 259 ntBASIC4.67□□□□□ -1.66
CDH12P55289 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC4.67□□□□□ -1.66
CDH12P55289 SETP20-201ENST00000457046 852 ntBASIC4.67□□□□□ -1.66
CDH12P55289 RNU7-27P-201ENST00000459281 62 ntBASIC4.67□□□□□ -1.66
CDH12P55289 AC096741.1-201ENST00000472250 846 ntBASIC4.67□□□□□ -1.66
CDH12P55289 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.67□□□□□ -1.66
CDH12P55289 RPL23AP37-201ENST00000479658 549 ntBASIC4.67□□□□□ -1.66
CDH12P55289 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.67□□□□□ -1.66
CDH12P55289 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CDH12P55289 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.67□□□□□ -1.66
CDH12P55289 AC108693.1-201ENST00000496068 432 ntBASIC4.67□□□□□ -1.66
CDH12P55289 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.67□□□□□ -1.66
CDH12P55289 AC034244.1-201ENST00000507687 207 ntBASIC4.67□□□□□ -1.66
CDH12P55289 AC104108.1-201ENST00000509930 412 ntBASIC4.67□□□□□ -1.66
CDH12P55289 ENPP7P9-201ENST00000514456 627 ntBASIC4.67□□□□□ -1.66
CDH12P55289 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.67□□□□□ -1.66
CDH12P55289 IGKV2D-10-201ENST00000520194 281 ntBASIC4.67□□□□□ -1.66
CDH12P55289 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.67□□□□□ -1.66
CDH12P55289 AP002812.4-201ENST00000532139 286 ntBASIC4.67□□□□□ -1.66
CDH12P55289 AC007834.2-201ENST00000536310 343 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms