Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CDH4P55283 RPS20P14-201ENST00000412545 360 ntBASIC4.52□□□□□ -1.69
CDH4P55283 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.52□□□□□ -1.69
CDH4P55283 CYCSP10-201ENST00000417973 294 ntBASIC4.52□□□□□ -1.69
CDH4P55283 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.52□□□□□ -1.69
CDH4P55283 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDH4P55283 AL132765.1-201ENST00000434165 553 ntBASIC4.52□□□□□ -1.69
CDH4P55283 CBX1P1-201ENST00000440184 427 ntBASIC4.52□□□□□ -1.69
CDH4P55283 CLIC4P1-201ENST00000453177 535 ntBASIC4.52□□□□□ -1.69
CDH4P55283 RPL7P32-201ENST00000457119 744 ntBASIC4.52□□□□□ -1.69
CDH4P55283 NDUFA5P9-201ENST00000472609 340 ntBASIC4.52□□□□□ -1.69
CDH4P55283 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.52□□□□□ -1.69
CDH4P55283 RPS27AP16-201ENST00000492222 470 ntBASIC4.52□□□□□ -1.69
CDH4P55283 ATG10-AS1-201ENST00000504846 648 ntBASIC4.52□□□□□ -1.69
CDH4P55283 AC117525.1-201ENST00000515228 503 ntBASIC4.52□□□□□ -1.69
CDH4P55283 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.52□□□□□ -1.69
CDH4P55283 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.52□□□□□ -1.69
CDH4P55283 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.52□□□□□ -1.69
CDH4P55283 ATP5J2P6-201ENST00000565203 266 ntBASIC4.52□□□□□ -1.69
CDH4P55283 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.52□□□□□ -1.69
CDH4P55283 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDH4P55283 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.52□□□□□ -1.69
CDH4P55283 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.52□□□□□ -1.69
CDH4P55283 AC010201.1-201ENST00000605051 540 ntBASIC4.52□□□□□ -1.69
CDH4P55283 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.52□□□□□ -1.69
CDH4P55283 AL121890.3-201ENST00000618494 516 ntBASIC4.52□□□□□ -1.69
CDH4P55283 AC007546.2-201ENST00000623996 360 ntBASIC4.52□□□□□ -1.69
CDH4P55283 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.52□□□□□ -1.69
CDH4P55283 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDH4P55283 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.52□□□□□ -1.69
CDH4P55283 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.52□□□□□ -1.69
CDH4P55283 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDH4P55283 AC009313.2-201ENST00000417893 1941 ntBASIC4.52□□□□□ -1.69
CDH4P55283 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDH4P55283 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.52□□□□□ -1.69
CDH4P55283 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.52□□□□□ -1.69
CDH4P55283 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
CDH4P55283 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDH4P55283 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDH4P55283 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.51□□□□□ -1.69
CDH4P55283 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CDH4P55283 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDH4P55283 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDH4P55283 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDH4P55283 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.51□□□□□ -1.69
CDH4P55283 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDH4P55283 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.51□□□□□ -1.69
CDH4P55283 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDH4P55283 OR10J6P-201ENST00000289731 930 ntBASIC4.51□□□□□ -1.69
CDH4P55283 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDH4P55283 MIR331-201ENST00000362302 94 ntBASIC4.51□□□□□ -1.69
CDH4P55283 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDH4P55283 RNU1-44P-201ENST00000384453 163 ntBASIC4.51□□□□□ -1.69
CDH4P55283 SNORD96B-201ENST00000386148 79 ntBASIC4.51□□□□□ -1.69
CDH4P55283 ST13P16-201ENST00000401760 781 ntBASIC4.51□□□□□ -1.69
CDH4P55283 RNU4-25P-201ENST00000410569 230 ntBASIC4.51□□□□□ -1.69
CDH4P55283 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CDH4P55283 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.51□□□□□ -1.69
CDH4P55283 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.51□□□□□ -1.69
CDH4P55283 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CDH4P55283 AC004690.1-201ENST00000418216 328 ntBASIC4.51□□□□□ -1.69
CDH4P55283 AC099336.2-201ENST00000422457 254 ntBASIC4.51□□□□□ -1.69
CDH4P55283 RPS26P47-201ENST00000427219 348 ntBASIC4.51□□□□□ -1.69
CDH4P55283 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.51□□□□□ -1.69
CDH4P55283 AC073587.1-201ENST00000447093 876 ntBASIC4.51□□□□□ -1.69
CDH4P55283 AC099560.2-201ENST00000457554 255 ntBASIC4.51□□□□□ -1.69
CDH4P55283 ATP1B1P1-201ENST00000509767 915 ntBASIC4.51□□□□□ -1.69
CDH4P55283 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.51□□□□□ -1.69
CDH4P55283 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.51□□□□□ -1.69
CDH4P55283 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.51□□□□□ -1.69
CDH4P55283 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CDH4P55283 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.51□□□□□ -1.69
CDH4P55283 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.51□□□□□ -1.69
CDH4P55283 MTCO2P22-201ENST00000603246 681 ntBASIC4.51□□□□□ -1.69
CDH4P55283 AC091979.2-201ENST00000607514 214 ntBASIC4.51□□□□□ -1.69
CDH4P55283 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.51□□□□□ -1.69
CDH4P55283 MIR378J-201ENST00000611988 109 ntBASIC4.51□□□□□ -1.69
CDH4P55283 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDH4P55283 HSPD1P11-201ENST00000508643 1702 ntBASIC4.51□□□□□ -1.69
CDH4P55283 AC093535.2-201ENST00000624769 2326 ntBASIC4.51□□□□□ -1.69
CDH4P55283 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CDH4P55283 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
CDH4P55283 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.5□□□□□ -1.69
CDH4P55283 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.5□□□□□ -1.69
CDH4P55283 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CDH4P55283 EIF2AP4-201ENST00000424793 1781 ntBASIC4.5□□□□□ -1.69
CDH4P55283 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CDH4P55283 AP000756.2-201ENST00000624168 2567 ntBASIC4.5□□□□□ -1.69
CDH4P55283 AC126755.2-208ENST00000327792 462 ntBASIC4.5□□□□□ -1.69
CDH4P55283 AC138969.1-213ENST00000331436 462 ntBASIC4.5□□□□□ -1.69
CDH4P55283 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
CDH4P55283 AC240504.1-201ENST00000395709 845 ntBASIC4.5□□□□□ -1.69
CDH4P55283 AL078604.1-201ENST00000404609 466 ntBASIC4.5□□□□□ -1.69
CDH4P55283 CEACAMP8-201ENST00000413902 580 ntBASIC4.5□□□□□ -1.69
CDH4P55283 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.5□□□□□ -1.69
CDH4P55283 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.5□□□□□ -1.69
CDH4P55283 RPS12P5-201ENST00000423449 371 ntBASIC4.5□□□□□ -1.69
CDH4P55283 AC073143.1-201ENST00000436316 395 ntBASIC4.5□□□□□ -1.69
CDH4P55283 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.5□□□□□ -1.69
CDH4P55283 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 158.7 ms