Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.35□□□□□ -1.55
COPB1P53618 AL772161.1-201ENST00000439130 476 ntBASIC5.35□□□□□ -1.55
COPB1P53618 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC5.35□□□□□ -1.55
COPB1P53618 MRPL48P1-201ENST00000445390 636 ntBASIC5.35□□□□□ -1.55
COPB1P53618 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.35□□□□□ -1.55
COPB1P53618 AL389915.2-201ENST00000454576 441 ntBASIC5.35□□□□□ -1.55
COPB1P53618 PTGES3P5-201ENST00000455109 434 ntBASIC5.35□□□□□ -1.55
COPB1P53618 COX6B1P5-201ENST00000509843 249 ntBASIC5.35□□□□□ -1.55
COPB1P53618 RNA5SP92-201ENST00000516437 110 ntBASIC5.35□□□□□ -1.55
COPB1P53618 SNORA31.13-201ENST00000516624 135 ntBASIC5.35□□□□□ -1.55
COPB1P53618 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.35□□□□□ -1.55
COPB1P53618 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
COPB1P53618 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC5.35□□□□□ -1.55
COPB1P53618 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC5.35□□□□□ -1.55
COPB1P53618 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC5.35□□□□□ -1.55
COPB1P53618 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
COPB1P53618 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.35□□□□□ -1.55
COPB1P53618 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC5.35□□□□□ -1.55
COPB1P53618 AC087897.1-201ENST00000550134 156 ntBASIC5.35□□□□□ -1.55
COPB1P53618 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
COPB1P53618 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.35□□□□□ -1.55
COPB1P53618 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC5.35□□□□□ -1.55
COPB1P53618 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.35□□□□□ -1.55
COPB1P53618 AC064807.4-201ENST00000607201 407 ntBASIC5.35□□□□□ -1.55
COPB1P53618 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC5.35□□□□□ -1.55
COPB1P53618 AL159169.2-201ENST00000610061 1269 ntBASIC5.35□□□□□ -1.55
COPB1P53618 AL022401.1-201ENST00000619498 108 ntBASIC5.35□□□□□ -1.55
COPB1P53618 AC012414.7-202ENST00000622705 1090 ntBASIC5.35□□□□□ -1.55
COPB1P53618 AC079416.3-201ENST00000624479 549 ntBASIC5.35□□□□□ -1.55
COPB1P53618 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC5.35□□□□□ -1.55
COPB1P53618 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
COPB1P53618 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
COPB1P53618 AC097461.1-201ENST00000568928 2821 ntBASIC5.35□□□□□ -1.55
COPB1P53618 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
COPB1P53618 AC104260.2-201ENST00000623551 3497 ntBASIC5.35□□□□□ -1.55
COPB1P53618 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
COPB1P53618 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
COPB1P53618 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
COPB1P53618 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
COPB1P53618 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
COPB1P53618 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
COPB1P53618 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
COPB1P53618 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
COPB1P53618 SNURFL-201ENST00000309296 343 ntBASIC5.34□□□□□ -1.55
COPB1P53618 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
COPB1P53618 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
COPB1P53618 RNU6-171P-201ENST00000384354 107 ntBASIC5.34□□□□□ -1.55
COPB1P53618 RNU6-932P-201ENST00000391108 106 ntBASIC5.34□□□□□ -1.55
COPB1P53618 AL021331.1-201ENST00000402817 582 ntBASIC5.34□□□□□ -1.55
COPB1P53618 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.34□□□□□ -1.55
COPB1P53618 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.34□□□□□ -1.55
COPB1P53618 RN7SKP125-201ENST00000410481 302 ntBASIC5.34□□□□□ -1.55
COPB1P53618 DPPA2P3-201ENST00000411853 655 ntBASIC5.34□□□□□ -1.55
COPB1P53618 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.34□□□□□ -1.55
COPB1P53618 TBCAP2-201ENST00000416175 326 ntBASIC5.34□□□□□ -1.55
COPB1P53618 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.34□□□□□ -1.55
COPB1P53618 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.34□□□□□ -1.55
COPB1P53618 AC012519.1-201ENST00000424588 610 ntBASIC5.34□□□□□ -1.55
COPB1P53618 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
COPB1P53618 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.34□□□□□ -1.55
COPB1P53618 AC004938.1-201ENST00000438468 308 ntBASIC5.34□□□□□ -1.55
COPB1P53618 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.34□□□□□ -1.55
COPB1P53618 AC023512.1-201ENST00000444513 499 ntBASIC5.34□□□□□ -1.55
COPB1P53618 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC5.34□□□□□ -1.55
COPB1P53618 TDGF1P1-201ENST00000445734 527 ntBASIC5.34□□□□□ -1.55
COPB1P53618 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.34□□□□□ -1.55
COPB1P53618 CCNB1IP1P3-201ENST00000454702 829 ntBASIC5.34□□□□□ -1.55
COPB1P53618 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.34□□□□□ -1.55
COPB1P53618 GTF2IP12-201ENST00000456547 356 ntBASIC5.34□□□□□ -1.55
COPB1P53618 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC5.34□□□□□ -1.55
COPB1P53618 RPS4XP6-201ENST00000477670 797 ntBASIC5.34□□□□□ -1.55
COPB1P53618 AC107398.1-201ENST00000486904 505 ntBASIC5.34□□□□□ -1.55
COPB1P53618 RN7SKP141-201ENST00000516167 338 ntBASIC5.34□□□□□ -1.55
COPB1P53618 RNA5SP392-201ENST00000516905 112 ntBASIC5.34□□□□□ -1.55
COPB1P53618 RNU6-709P-201ENST00000517257 104 ntBASIC5.34□□□□□ -1.55
COPB1P53618 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.34□□□□□ -1.55
COPB1P53618 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.34□□□□□ -1.55
COPB1P53618 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.34□□□□□ -1.55
COPB1P53618 EMP1-206ENST00000537612 505 ntTSL 3 BASIC5.34□□□□□ -1.55
COPB1P53618 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC5.34□□□□□ -1.55
COPB1P53618 MTND4P33-201ENST00000556706 766 ntBASIC5.34□□□□□ -1.55
COPB1P53618 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
COPB1P53618 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
COPB1P53618 TVP23CP2-201ENST00000571473 623 ntBASIC5.34□□□□□ -1.55
COPB1P53618 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC5.34□□□□□ -1.55
COPB1P53618 MIR4700-201ENST00000578311 74 ntBASIC5.34□□□□□ -1.55
COPB1P53618 FAM106CP-201ENST00000582212 507 ntBASIC5.34□□□□□ -1.55
COPB1P53618 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.34□□□□□ -1.55
COPB1P53618 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.34□□□□□ -1.55
COPB1P53618 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
COPB1P53618 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC5.34□□□□□ -1.55
COPB1P53618 AL035411.2-201ENST00000604022 421 ntBASIC5.34□□□□□ -1.55
COPB1P53618 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.34□□□□□ -1.55
COPB1P53618 AL122125.1-201ENST00000616999 600 ntBASIC5.34□□□□□ -1.55
COPB1P53618 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.34□□□□□ -1.55
COPB1P53618 BX649567.1-201ENST00000642071 1134 ntBASIC5.34□□□□□ -1.55
COPB1P53618 SPATA2P1-201ENST00000431223 2055 ntBASIC5.34□□□□□ -1.55
COPB1P53618 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
COPB1P53618 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
COPB1P53618 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms