Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 STAT4-203ENST00000409995 709 ntTSL 5 BASIC4.62□□□□□ -1.67
PDX1P52945 ATG4AP1-201ENST00000416893 538 ntBASIC4.62□□□□□ -1.67
PDX1P52945 AL592293.2-201ENST00000422292 996 ntBASIC4.62□□□□□ -1.67
PDX1P52945 DPY19L1P2-201ENST00000426647 915 ntBASIC4.62□□□□□ -1.67
PDX1P52945 AL732292.1-201ENST00000426692 226 ntBASIC4.62□□□□□ -1.67
PDX1P52945 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.62□□□□□ -1.67
PDX1P52945 AC006994.1-201ENST00000438212 839 ntBASIC4.62□□□□□ -1.67
PDX1P52945 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.62□□□□□ -1.67
PDX1P52945 GTF3AP5-201ENST00000442645 697 ntBASIC4.62□□□□□ -1.67
PDX1P52945 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PDX1P52945 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PDX1P52945 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
PDX1P52945 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.62□□□□□ -1.67
PDX1P52945 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.62□□□□□ -1.67
PDX1P52945 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.62□□□□□ -1.67
PDX1P52945 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.62□□□□□ -1.67
PDX1P52945 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.62□□□□□ -1.67
PDX1P52945 AL161747.1-201ENST00000480068 358 ntBASIC4.62□□□□□ -1.67
PDX1P52945 RPL21P47-201ENST00000483696 477 ntBASIC4.62□□□□□ -1.67
PDX1P52945 AC104971.1-201ENST00000495117 578 ntBASIC4.62□□□□□ -1.67
PDX1P52945 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.62□□□□□ -1.67
PDX1P52945 AC025674.1-201ENST00000507074 324 ntBASIC4.62□□□□□ -1.67
PDX1P52945 AC119751.4-201ENST00000507498 357 ntBASIC4.62□□□□□ -1.67
PDX1P52945 RNU5A-7P-201ENST00000515979 116 ntBASIC4.62□□□□□ -1.67
PDX1P52945 RNU6-1004P-201ENST00000516584 111 ntBASIC4.62□□□□□ -1.67
PDX1P52945 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC4.62□□□□□ -1.67
PDX1P52945 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PDX1P52945 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.62□□□□□ -1.67
PDX1P52945 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PDX1P52945 AL049870.4-201ENST00000555741 486 ntBASIC4.62□□□□□ -1.67
PDX1P52945 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.62□□□□□ -1.67
PDX1P52945 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.62□□□□□ -1.67
PDX1P52945 AC090330.1-201ENST00000588646 764 ntBASIC4.62□□□□□ -1.67
PDX1P52945 AC012254.4-201ENST00000588843 273 ntBASIC4.62□□□□□ -1.67
PDX1P52945 AL049844.2-201ENST00000604280 628 ntBASIC4.62□□□□□ -1.67
PDX1P52945 AC105148.1-201ENST00000604961 409 ntBASIC4.62□□□□□ -1.67
PDX1P52945 AF129408.1-201ENST00000608767 431 ntBASIC4.62□□□□□ -1.67
PDX1P52945 AC009269.6-201ENST00000621778 588 ntBASIC4.62□□□□□ -1.67
PDX1P52945 AL672167.1-204ENST00000641875 3017 ntBASIC4.62□□□□□ -1.67
PDX1P52945 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PDX1P52945 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
PDX1P52945 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
PDX1P52945 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PDX1P52945 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.62□□□□□ -1.67
PDX1P52945 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
PDX1P52945 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.61□□□□□ -1.67
PDX1P52945 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.61□□□□□ -1.67
PDX1P52945 RLIMP2-201ENST00000427891 1563 ntBASIC4.61□□□□□ -1.67
PDX1P52945 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PDX1P52945 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
PDX1P52945 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.61□□□□□ -1.67
PDX1P52945 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.61□□□□□ -1.67
PDX1P52945 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PDX1P52945 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PDX1P52945 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PDX1P52945 IGKV7-3-201ENST00000357453 298 ntBASIC4.61□□□□□ -1.67
PDX1P52945 RNU6-354P-201ENST00000383862 107 ntBASIC4.61□□□□□ -1.67
PDX1P52945 RNU6-610P-201ENST00000384264 107 ntBASIC4.61□□□□□ -1.67
PDX1P52945 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
PDX1P52945 SNORA79B-201ENST00000410557 148 ntBASIC4.61□□□□□ -1.67
PDX1P52945 RNU4-25P-201ENST00000410569 230 ntBASIC4.61□□□□□ -1.67
PDX1P52945 CTSL3P-202ENST00000412179 788 ntBASIC4.61□□□□□ -1.67
PDX1P52945 LINC01347-201ENST00000417964 355 ntBASIC4.61□□□□□ -1.67
PDX1P52945 VN1R37P-201ENST00000419096 748 ntBASIC4.61□□□□□ -1.67
PDX1P52945 AC234779.1-201ENST00000425910 285 ntBASIC4.61□□□□□ -1.67
PDX1P52945 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.61□□□□□ -1.67
PDX1P52945 MTCO1P43-201ENST00000431831 488 ntBASIC4.61□□□□□ -1.67
PDX1P52945 AC073143.1-201ENST00000436316 395 ntBASIC4.61□□□□□ -1.67
PDX1P52945 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.61□□□□□ -1.67
PDX1P52945 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.61□□□□□ -1.67
PDX1P52945 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.61□□□□□ -1.67
PDX1P52945 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.61□□□□□ -1.67
PDX1P52945 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.61□□□□□ -1.67
PDX1P52945 ARL2BPP10-201ENST00000446487 531 ntBASIC4.61□□□□□ -1.67
PDX1P52945 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.61□□□□□ -1.67
PDX1P52945 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PDX1P52945 RPL10P17-201ENST00000453852 316 ntBASIC4.61□□□□□ -1.67
PDX1P52945 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.61□□□□□ -1.67
PDX1P52945 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.61□□□□□ -1.67
PDX1P52945 AC008379.1-201ENST00000463655 464 ntBASIC4.61□□□□□ -1.67
PDX1P52945 RPL21P18-201ENST00000469899 480 ntBASIC4.61□□□□□ -1.67
PDX1P52945 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.61□□□□□ -1.67
PDX1P52945 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.61□□□□□ -1.67
PDX1P52945 AC091868.1-201ENST00000508746 304 ntBASIC4.61□□□□□ -1.67
PDX1P52945 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.61□□□□□ -1.67
PDX1P52945 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.61□□□□□ -1.67
PDX1P52945 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.61□□□□□ -1.67
PDX1P52945 NPM1P35-201ENST00000533043 868 ntBASIC4.61□□□□□ -1.67
PDX1P52945 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC4.61□□□□□ -1.67
PDX1P52945 AC133555.2-201ENST00000550213 292 ntBASIC4.61□□□□□ -1.67
PDX1P52945 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PDX1P52945 MIR5699-201ENST00000578903 90 ntBASIC4.61□□□□□ -1.67
PDX1P52945 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.61□□□□□ -1.67
PDX1P52945 AC005156.1-201ENST00000613371 573 ntBASIC4.61□□□□□ -1.67
PDX1P52945 AC104763.3-201ENST00000613765 618 ntBASIC4.61□□□□□ -1.67
PDX1P52945 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.61□□□□□ -1.67
PDX1P52945 AC006338.2-201ENST00000616864 791 ntBASIC4.61□□□□□ -1.67
PDX1P52945 AC015914.2-201ENST00000618167 288 ntBASIC4.61□□□□□ -1.67
PDX1P52945 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.61□□□□□ -1.67
PDX1P52945 AL356118.1-201ENST00000635272 1078 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms