Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AC098799.3-201ENST00000506095 438 ntBASIC4.35□□□□□ -1.71
RORAP35398 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.35□□□□□ -1.71
RORAP35398 RNU6-319P-201ENST00000516025 108 ntBASIC4.35□□□□□ -1.71
RORAP35398 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.35□□□□□ -1.71
RORAP35398 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.35□□□□□ -1.71
RORAP35398 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.35□□□□□ -1.71
RORAP35398 AC136624.4-201ENST00000573044 370 ntBASIC4.35□□□□□ -1.71
RORAP35398 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.35□□□□□ -1.71
RORAP35398 FAM60CP-201ENST00000591086 664 ntBASIC4.35□□□□□ -1.71
RORAP35398 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.35□□□□□ -1.71
RORAP35398 AC034236.3-201ENST00000605999 461 ntBASIC4.35□□□□□ -1.71
RORAP35398 AC012409.3-201ENST00000611343 981 ntBASIC4.35□□□□□ -1.71
RORAP35398 AP005019.3-201ENST00000620418 560 ntBASIC4.35□□□□□ -1.71
RORAP35398 AP006248.2-201ENST00000623309 592 ntBASIC4.35□□□□□ -1.71
RORAP35398 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
RORAP35398 AL133268.1-201ENST00000405676 1401 ntBASIC4.35□□□□□ -1.71
RORAP35398 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RORAP35398 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RORAP35398 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RORAP35398 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RORAP35398 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.34□□□□□ -1.71
RORAP35398 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RORAP35398 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RORAP35398 AC027290.2-201ENST00000623210 18662 ntBASIC4.34□□□□□ -1.71
RORAP35398 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
RORAP35398 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
RORAP35398 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.71
RORAP35398 AL356489.2-201ENST00000566968 3528 ntBASIC4.34□□□□□ -1.71
RORAP35398 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
RORAP35398 RNU6-304P-201ENST00000364855 107 ntBASIC4.34□□□□□ -1.71
RORAP35398 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.34□□□□□ -1.71
RORAP35398 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
RORAP35398 AL592291.1-201ENST00000403830 352 ntBASIC4.34□□□□□ -1.71
RORAP35398 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RORAP35398 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.34□□□□□ -1.71
RORAP35398 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.34□□□□□ -1.71
RORAP35398 EIF4EP1-201ENST00000422311 642 ntBASIC4.34□□□□□ -1.71
RORAP35398 RPL7AP25-201ENST00000423357 805 ntBASIC4.34□□□□□ -1.71
RORAP35398 SEC63P1-201ENST00000425785 1258 ntBASIC4.34□□□□□ -1.71
RORAP35398 AC092017.2-201ENST00000427600 362 ntBASIC4.34□□□□□ -1.71
RORAP35398 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.34□□□□□ -1.71
RORAP35398 AC069285.2-201ENST00000440210 275 ntBASIC4.34□□□□□ -1.71
RORAP35398 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.34□□□□□ -1.71
RORAP35398 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.34□□□□□ -1.71
RORAP35398 RN7SKP122-201ENST00000515923 296 ntBASIC4.34□□□□□ -1.71
RORAP35398 IGKV2D-10-201ENST00000520194 281 ntBASIC4.34□□□□□ -1.71
RORAP35398 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RORAP35398 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.34□□□□□ -1.71
RORAP35398 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
RORAP35398 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.34□□□□□ -1.71
RORAP35398 AC090953.1-201ENST00000604305 1092 ntBASIC4.34□□□□□ -1.71
RORAP35398 AC007620.3-201ENST00000608131 497 ntBASIC4.34□□□□□ -1.71
RORAP35398 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.34□□□□□ -1.71
RORAP35398 SNX18P1Y-201ENST00000616231 511 ntBASIC4.34□□□□□ -1.71
RORAP35398 AL035461.2-201ENST00000619201 524 ntBASIC4.34□□□□□ -1.71
RORAP35398 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.34□□□□□ -1.71
RORAP35398 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
RORAP35398 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
RORAP35398 Z73965.1-201ENST00000623412 2297 ntBASIC4.34□□□□□ -1.72
RORAP35398 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
RORAP35398 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.72
RORAP35398 AC010300.1-201ENST00000600671 5134 ntBASIC4.34□□□□□ -1.72
RORAP35398 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RORAP35398 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RORAP35398 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.33□□□□□ -1.72
RORAP35398 MTND4P26-201ENST00000415971 1359 ntBASIC4.33□□□□□ -1.72
RORAP35398 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RORAP35398 RPL23AP59-201ENST00000399415 461 ntBASIC4.33□□□□□ -1.72
RORAP35398 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RORAP35398 AL160275.2-201ENST00000412010 394 ntBASIC4.33□□□□□ -1.72
RORAP35398 AL356387.2-201ENST00000422272 243 ntBASIC4.33□□□□□ -1.72
RORAP35398 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.33□□□□□ -1.72
RORAP35398 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RORAP35398 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.33□□□□□ -1.72
RORAP35398 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.33□□□□□ -1.72
RORAP35398 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.33□□□□□ -1.72
RORAP35398 AL121877.1-201ENST00000453704 622 ntBASIC4.33□□□□□ -1.72
RORAP35398 ISCUP1-201ENST00000454451 448 ntBASIC4.33□□□□□ -1.72
RORAP35398 AC011276.1-201ENST00000469688 323 ntBASIC4.33□□□□□ -1.72
RORAP35398 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC4.33□□□□□ -1.72
RORAP35398 AC015795.1-201ENST00000513669 327 ntBASIC4.33□□□□□ -1.72
RORAP35398 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.33□□□□□ -1.72
RORAP35398 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.33□□□□□ -1.72
RORAP35398 OR8G5-201ENST00000524943 1041 ntBASIC4.33□□□□□ -1.72
RORAP35398 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.33□□□□□ -1.72
RORAP35398 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
RORAP35398 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.33□□□□□ -1.72
RORAP35398 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.33□□□□□ -1.72
RORAP35398 AL049874.4-201ENST00000557593 255 ntBASIC4.33□□□□□ -1.72
RORAP35398 AC084373.1-201ENST00000603311 235 ntBASIC4.33□□□□□ -1.72
RORAP35398 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.33□□□□□ -1.72
RORAP35398 AC107905.1-201ENST00000616204 426 ntBASIC4.33□□□□□ -1.72
RORAP35398 AC006338.2-201ENST00000616864 791 ntBASIC4.33□□□□□ -1.72
RORAP35398 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RORAP35398 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.33□□□□□ -1.72
RORAP35398 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
RORAP35398 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
RORAP35398 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RORAP35398 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
RORAP35398 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms