Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HOXC13P31276 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HOXC13P31276 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC5.03□□□□□ -1.6
HOXC13P31276 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
HOXC13P31276 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HOXC13P31276 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.03□□□□□ -1.6
HOXC13P31276 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HOXC13P31276 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5.03□□□□□ -1.6
HOXC13P31276 RNU6-1279P-201ENST00000383917 103 ntBASIC5.03□□□□□ -1.6
HOXC13P31276 UBE2V1P15-201ENST00000407776 448 ntBASIC5.03□□□□□ -1.6
HOXC13P31276 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.03□□□□□ -1.6
HOXC13P31276 TMBIM7P-201ENST00000418074 855 ntBASIC5.03□□□□□ -1.6
HOXC13P31276 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.03□□□□□ -1.6
HOXC13P31276 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HOXC13P31276 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.03□□□□□ -1.6
HOXC13P31276 AC092162.1-201ENST00000432828 434 ntBASIC5.03□□□□□ -1.6
HOXC13P31276 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC5.03□□□□□ -1.6
HOXC13P31276 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.03□□□□□ -1.6
HOXC13P31276 AC005154.2-201ENST00000438110 379 ntBASIC5.03□□□□□ -1.6
HOXC13P31276 AC006326.1-201ENST00000445465 787 ntBASIC5.03□□□□□ -1.6
HOXC13P31276 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.03□□□□□ -1.6
HOXC13P31276 MTND2P8-201ENST00000450555 1025 ntBASIC5.03□□□□□ -1.6
HOXC13P31276 HMGB1P5-202ENST00000451497 985 ntBASIC5.03□□□□□ -1.6
HOXC13P31276 AC091153.1-201ENST00000466297 402 ntBASIC5.03□□□□□ -1.6
HOXC13P31276 S100A11P1-201ENST00000477525 312 ntBASIC5.03□□□□□ -1.6
HOXC13P31276 AC013356.1-201ENST00000489027 564 ntBASIC5.03□□□□□ -1.6
HOXC13P31276 AC083829.1-201ENST00000503756 657 ntBASIC5.03□□□□□ -1.6
HOXC13P31276 AC113430.1-201ENST00000506872 718 ntBASIC5.03□□□□□ -1.6
HOXC13P31276 SETP12-201ENST00000514068 805 ntBASIC5.03□□□□□ -1.6
HOXC13P31276 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5.03□□□□□ -1.6
HOXC13P31276 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
HOXC13P31276 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.03□□□□□ -1.6
HOXC13P31276 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC5.03□□□□□ -1.6
HOXC13P31276 AL161713.1-201ENST00000555538 145 ntBASIC5.03□□□□□ -1.6
HOXC13P31276 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC5.03□□□□□ -1.6
HOXC13P31276 AC010857.1-201ENST00000606398 594 ntBASIC5.03□□□□□ -1.6
HOXC13P31276 AC025175.1-201ENST00000606482 759 ntBASIC5.03□□□□□ -1.6
HOXC13P31276 AC245389.2-201ENST00000616023 576 ntBASIC5.03□□□□□ -1.6
HOXC13P31276 AC242843.1-201ENST00000618702 573 ntBASIC5.03□□□□□ -1.6
HOXC13P31276 AL022401.1-201ENST00000619498 108 ntBASIC5.03□□□□□ -1.6
HOXC13P31276 MIR6853-201ENST00000619642 74 ntBASIC5.03□□□□□ -1.6
HOXC13P31276 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.03□□□□□ -1.6
HOXC13P31276 AC009452.1-201ENST00000640823 606 ntBASIC5.03□□□□□ -1.6
HOXC13P31276 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
HOXC13P31276 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
HOXC13P31276 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.03□□□□□ -1.6
HOXC13P31276 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
HOXC13P31276 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.03□□□□□ -1.6
HOXC13P31276 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.03□□□□□ -1.6
HOXC13P31276 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HOXC13P31276 AC008079.2-201ENST00000623543 20396 ntBASIC5.02□□□□□ -1.61
HOXC13P31276 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.02□□□□□ -1.61
HOXC13P31276 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
HOXC13P31276 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
HOXC13P31276 DHX9P1-201ENST00000436565 3076 ntBASIC5.02□□□□□ -1.61
HOXC13P31276 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HOXC13P31276 MUC2-202ENST00000613187 4845 ntBASIC5.02□□□□□ -1.61
HOXC13P31276 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HOXC13P31276 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.02□□□□□ -1.61
HOXC13P31276 RNU1-87P-201ENST00000363727 170 ntBASIC5.02□□□□□ -1.61
HOXC13P31276 RNA5SP515-201ENST00000364570 118 ntBASIC5.02□□□□□ -1.61
HOXC13P31276 AL049693.1-201ENST00000402760 611 ntBASIC5.02□□□□□ -1.61
HOXC13P31276 RPS27AP7-201ENST00000422792 455 ntBASIC5.02□□□□□ -1.61
HOXC13P31276 AL645608.4-201ENST00000423619 154 ntBASIC5.02□□□□□ -1.61
HOXC13P31276 RPEP3-201ENST00000425462 676 ntBASIC5.02□□□□□ -1.61
HOXC13P31276 AC234779.1-201ENST00000425910 285 ntBASIC5.02□□□□□ -1.61
HOXC13P31276 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.02□□□□□ -1.61
HOXC13P31276 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.02□□□□□ -1.61
HOXC13P31276 AL359265.2-201ENST00000434367 631 ntBASIC5.02□□□□□ -1.61
HOXC13P31276 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.02□□□□□ -1.61
HOXC13P31276 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.02□□□□□ -1.61
HOXC13P31276 AC007000.2-201ENST00000442564 487 ntBASIC5.02□□□□□ -1.61
HOXC13P31276 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.02□□□□□ -1.61
HOXC13P31276 EIF2S2P5-201ENST00000457635 968 ntBASIC5.02□□□□□ -1.61
HOXC13P31276 RPL7AP28-201ENST00000464513 571 ntBASIC5.02□□□□□ -1.61
HOXC13P31276 SYT14P1-201ENST00000481459 721 ntBASIC5.02□□□□□ -1.61
HOXC13P31276 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HOXC13P31276 AC011037.1-201ENST00000483964 558 ntBASIC5.02□□□□□ -1.61
HOXC13P31276 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.02□□□□□ -1.61
HOXC13P31276 COL6A4P2-205ENST00000509855 506 ntBASIC5.02□□□□□ -1.61
HOXC13P31276 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.02□□□□□ -1.61
HOXC13P31276 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.02□□□□□ -1.61
HOXC13P31276 OR4A2P-201ENST00000527276 913 ntBASIC5.02□□□□□ -1.61
HOXC13P31276 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.02□□□□□ -1.61
HOXC13P31276 AC009643.1-201ENST00000532030 391 ntBASIC5.02□□□□□ -1.61
HOXC13P31276 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC5.02□□□□□ -1.61
HOXC13P31276 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.02□□□□□ -1.61
HOXC13P31276 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC5.02□□□□□ -1.61
HOXC13P31276 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.02□□□□□ -1.61
HOXC13P31276 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.02□□□□□ -1.61
HOXC13P31276 AC093765.1-201ENST00000603758 881 ntBASIC5.02□□□□□ -1.61
HOXC13P31276 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HOXC13P31276 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC5.02□□□□□ -1.61
HOXC13P31276 AC024023.1-201ENST00000624530 922 ntBASIC5.02□□□□□ -1.61
HOXC13P31276 MIR6830-201ENST00000636015 70 ntBASIC5.02□□□□□ -1.61
HOXC13P31276 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.02□□□□□ -1.61
HOXC13P31276 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
HOXC13P31276 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.02□□□□□ -1.61
HOXC13P31276 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
HOXC13P31276 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms