Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AC127024.5-201ENST00000580085 462 ntBASIC5.53□□□□□ -1.52
TM4SF1P30408 AC024220.1-201ENST00000603675 484 ntBASIC5.53□□□□□ -1.52
TM4SF1P30408 AL450270.1-201ENST00000606160 391 ntBASIC5.53□□□□□ -1.52
TM4SF1P30408 AL356274.1-201ENST00000617064 410 ntBASIC5.53□□□□□ -1.52
TM4SF1P30408 MIR6875-201ENST00000617506 72 ntBASIC5.53□□□□□ -1.52
TM4SF1P30408 AC145207.9-201ENST00000623802 325 ntBASIC5.53□□□□□ -1.52
TM4SF1P30408 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TM4SF1P30408 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TM4SF1P30408 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
TM4SF1P30408 DHX9P1-201ENST00000436565 3076 ntBASIC5.53□□□□□ -1.52
TM4SF1P30408 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.53□□□□□ -1.52
TM4SF1P30408 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.53□□□□□ -1.52
TM4SF1P30408 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TM4SF1P30408 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
TM4SF1P30408 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.52□□□□□ -1.53
TM4SF1P30408 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
TM4SF1P30408 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TM4SF1P30408 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TM4SF1P30408 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.52□□□□□ -1.53
TM4SF1P30408 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
TM4SF1P30408 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
TM4SF1P30408 CASC19-206ENST00000641028 1430 ntBASIC5.52□□□□□ -1.53
TM4SF1P30408 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
TM4SF1P30408 SNORA71.3-201ENST00000362582 128 ntBASIC5.52□□□□□ -1.53
TM4SF1P30408 RNA5SP130-201ENST00000364431 114 ntBASIC5.52□□□□□ -1.53
TM4SF1P30408 RNA5SP513-201ENST00000364648 118 ntBASIC5.52□□□□□ -1.53
TM4SF1P30408 SNORA62.3-201ENST00000365110 153 ntBASIC5.52□□□□□ -1.53
TM4SF1P30408 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.52□□□□□ -1.53
TM4SF1P30408 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.52□□□□□ -1.53
TM4SF1P30408 AL357078.2-201ENST00000416486 427 ntBASIC5.52□□□□□ -1.53
TM4SF1P30408 AC022022.1-201ENST00000430304 178 ntBASIC5.52□□□□□ -1.53
TM4SF1P30408 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.52□□□□□ -1.53
TM4SF1P30408 AL162151.2-201ENST00000448875 158 ntBASIC5.52□□□□□ -1.53
TM4SF1P30408 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.52□□□□□ -1.53
TM4SF1P30408 TPT1P3-201ENST00000492841 512 ntBASIC5.52□□□□□ -1.53
TM4SF1P30408 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.52□□□□□ -1.53
TM4SF1P30408 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.52□□□□□ -1.53
TM4SF1P30408 AC103833.1-201ENST00000517442 172 ntBASIC5.52□□□□□ -1.53
TM4SF1P30408 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.52□□□□□ -1.53
TM4SF1P30408 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC5.52□□□□□ -1.53
TM4SF1P30408 AGGF1P6-201ENST00000569213 976 ntBASIC5.52□□□□□ -1.53
TM4SF1P30408 AC015912.2-201ENST00000571053 181 ntBASIC5.52□□□□□ -1.53
TM4SF1P30408 AC053481.4-201ENST00000583164 216 ntBASIC5.52□□□□□ -1.53
TM4SF1P30408 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.52□□□□□ -1.53
TM4SF1P30408 AC135178.6-201ENST00000605314 398 ntBASIC5.52□□□□□ -1.53
TM4SF1P30408 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.52□□□□□ -1.53
TM4SF1P30408 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.52□□□□□ -1.53
TM4SF1P30408 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC5.52□□□□□ -1.53
TM4SF1P30408 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.52□□□□□ -1.53
TM4SF1P30408 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TM4SF1P30408 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TM4SF1P30408 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TM4SF1P30408 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
TM4SF1P30408 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TM4SF1P30408 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
TM4SF1P30408 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.51□□□□□ -1.53
TM4SF1P30408 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TM4SF1P30408 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TM4SF1P30408 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.51□□□□□ -1.53
TM4SF1P30408 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.51□□□□□ -1.53
TM4SF1P30408 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TM4SF1P30408 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
TM4SF1P30408 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
TM4SF1P30408 AC027228.2-201ENST00000567141 2154 ntBASIC5.51□□□□□ -1.53
TM4SF1P30408 PTMAP2-201ENST00000397627 327 ntBASIC5.51□□□□□ -1.53
TM4SF1P30408 RPL6P29-201ENST00000414863 865 ntBASIC5.51□□□□□ -1.53
TM4SF1P30408 MFSD13B-201ENST00000420133 1290 ntBASIC5.51□□□□□ -1.53
TM4SF1P30408 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.51□□□□□ -1.53
TM4SF1P30408 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TM4SF1P30408 RPL21P43-201ENST00000425440 472 ntBASIC5.51□□□□□ -1.53
TM4SF1P30408 AL157831.1-201ENST00000426134 473 ntBASIC5.51□□□□□ -1.53
TM4SF1P30408 HSPE1P16-201ENST00000426640 348 ntBASIC5.51□□□□□ -1.53
TM4SF1P30408 MRPL50P1-201ENST00000431951 384 ntBASIC5.51□□□□□ -1.53
TM4SF1P30408 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.51□□□□□ -1.53
TM4SF1P30408 AL356276.2-201ENST00000435919 558 ntBASIC5.51□□□□□ -1.53
TM4SF1P30408 CACYBPP1-201ENST00000438592 684 ntBASIC5.51□□□□□ -1.53
TM4SF1P30408 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.51□□□□□ -1.53
TM4SF1P30408 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.51□□□□□ -1.53
TM4SF1P30408 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.51□□□□□ -1.53
TM4SF1P30408 AL133244.1-201ENST00000456007 258 ntBASIC5.51□□□□□ -1.53
TM4SF1P30408 AC092691.2-201ENST00000461787 803 ntBASIC5.51□□□□□ -1.53
TM4SF1P30408 AC091959.2-201ENST00000477363 321 ntBASIC5.51□□□□□ -1.53
TM4SF1P30408 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TM4SF1P30408 AC010468.3-201ENST00000508225 458 ntBASIC5.51□□□□□ -1.53
TM4SF1P30408 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TM4SF1P30408 NPM1P41-201ENST00000512920 831 ntBASIC5.51□□□□□ -1.53
TM4SF1P30408 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.51□□□□□ -1.53
TM4SF1P30408 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.51□□□□□ -1.53
TM4SF1P30408 AC105233.3-201ENST00000531125 744 ntBASIC5.51□□□□□ -1.53
TM4SF1P30408 OSBPL9P3-201ENST00000534523 595 ntBASIC5.51□□□□□ -1.53
TM4SF1P30408 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.51□□□□□ -1.53
TM4SF1P30408 AL049870.4-201ENST00000555741 486 ntBASIC5.51□□□□□ -1.53
TM4SF1P30408 TVP23BP1-201ENST00000557500 617 ntBASIC5.51□□□□□ -1.53
TM4SF1P30408 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC5.51□□□□□ -1.53
TM4SF1P30408 AC023158.1-201ENST00000561632 1025 ntBASIC5.51□□□□□ -1.53
TM4SF1P30408 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.51□□□□□ -1.53
TM4SF1P30408 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.51□□□□□ -1.53
TM4SF1P30408 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.51□□□□□ -1.53
TM4SF1P30408 AC023762.1-201ENST00000603280 584 ntBASIC5.51□□□□□ -1.53
TM4SF1P30408 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms