Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.86□□□□□ -1.63
COL4A5P29400 AC091167.4-201ENST00000605079 184 ntBASIC4.86□□□□□ -1.63
COL4A5P29400 MIR432-201ENST00000606207 94 ntBASIC4.86□□□□□ -1.63
COL4A5P29400 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
COL4A5P29400 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
COL4A5P29400 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
COL4A5P29400 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
COL4A5P29400 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
COL4A5P29400 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL4A5P29400 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL4A5P29400 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
COL4A5P29400 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
COL4A5P29400 AP001273.1-201ENST00000624493 3152 ntBASIC4.85□□□□□ -1.63
COL4A5P29400 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
COL4A5P29400 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
COL4A5P29400 RNVU1-14-201ENST00000384770 164 ntBASIC4.85□□□□□ -1.63
COL4A5P29400 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.85□□□□□ -1.63
COL4A5P29400 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.85□□□□□ -1.63
COL4A5P29400 AC018635.1-201ENST00000468292 1030 ntBASIC4.85□□□□□ -1.63
COL4A5P29400 SNORA70.24-201ENST00000517233 118 ntBASIC4.85□□□□□ -1.63
COL4A5P29400 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.85□□□□□ -1.63
COL4A5P29400 CYCSP30-201ENST00000546447 172 ntBASIC4.85□□□□□ -1.63
COL4A5P29400 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.85□□□□□ -1.63
COL4A5P29400 AC005972.3-201ENST00000606304 481 ntBASIC4.85□□□□□ -1.63
COL4A5P29400 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.85□□□□□ -1.63
COL4A5P29400 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
COL4A5P29400 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
COL4A5P29400 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.84□□□□□ -1.63
COL4A5P29400 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
COL4A5P29400 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL4A5P29400 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL4A5P29400 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.84□□□□□ -1.63
COL4A5P29400 SNORA60-201ENST00000362396 134 ntBASIC4.84□□□□□ -1.63
COL4A5P29400 SNORD96B-201ENST00000386148 79 ntBASIC4.84□□□□□ -1.63
COL4A5P29400 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.84□□□□□ -1.63
COL4A5P29400 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.84□□□□□ -1.63
COL4A5P29400 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
COL4A5P29400 RN7SL293P-201ENST00000481765 281 ntBASIC4.84□□□□□ -1.63
COL4A5P29400 AC026427.2-201ENST00000506228 536 ntBASIC4.84□□□□□ -1.63
COL4A5P29400 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.84□□□□□ -1.63
COL4A5P29400 MRPS21P9-201ENST00000571150 257 ntBASIC4.84□□□□□ -1.63
COL4A5P29400 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.84□□□□□ -1.63
COL4A5P29400 MIR8069-1-201ENST00000616627 86 ntBASIC4.84□□□□□ -1.63
COL4A5P29400 MIR7975-201ENST00000619350 68 ntBASIC4.84□□□□□ -1.63
COL4A5P29400 MIR8069-2-201ENST00000621412 86 ntBASIC4.84□□□□□ -1.63
COL4A5P29400 AC005086.4-201ENST00000623065 213 ntBASIC4.84□□□□□ -1.63
COL4A5P29400 AC019278.1-201ENST00000623516 479 ntBASIC4.84□□□□□ -1.63
COL4A5P29400 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL4A5P29400 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
COL4A5P29400 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
COL4A5P29400 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
COL4A5P29400 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.84□□□□□ -1.64
COL4A5P29400 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
COL4A5P29400 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL4A5P29400 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
COL4A5P29400 RN7SKP186-201ENST00000365371 303 ntBASIC4.83□□□□□ -1.64
COL4A5P29400 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
COL4A5P29400 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
COL4A5P29400 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL4A5P29400 HMGB3P19-201ENST00000403971 560 ntBASIC4.83□□□□□ -1.64
COL4A5P29400 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL4A5P29400 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.83□□□□□ -1.64
COL4A5P29400 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.83□□□□□ -1.64
COL4A5P29400 RPL29P14-201ENST00000495837 428 ntBASIC4.83□□□□□ -1.64
COL4A5P29400 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.83□□□□□ -1.64
COL4A5P29400 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.83□□□□□ -1.64
COL4A5P29400 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.83□□□□□ -1.64
COL4A5P29400 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
COL4A5P29400 AL359219.2-201ENST00000555184 348 ntBASIC4.83□□□□□ -1.64
COL4A5P29400 AC027807.1-201ENST00000559921 996 ntBASIC4.83□□□□□ -1.64
COL4A5P29400 MIR3651-201ENST00000630427 90 ntBASIC4.83□□□□□ -1.64
COL4A5P29400 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
COL4A5P29400 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
COL4A5P29400 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
COL4A5P29400 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
COL4A5P29400 AL049781.1-201ENST00000623195 3585 ntBASIC4.83□□□□□ -1.64
COL4A5P29400 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
COL4A5P29400 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
COL4A5P29400 MIR133A2-201ENST00000347538 102 ntBASIC4.83□□□□□ -1.64
COL4A5P29400 Z97055.1-201ENST00000419730 712 ntBASIC4.83□□□□□ -1.64
COL4A5P29400 AC128716.1-201ENST00000475129 166 ntBASIC4.83□□□□□ -1.64
COL4A5P29400 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.83□□□□□ -1.64
COL4A5P29400 PPIAP15-201ENST00000479662 484 ntBASIC4.83□□□□□ -1.64
COL4A5P29400 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.83□□□□□ -1.64
COL4A5P29400 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.83□□□□□ -1.64
COL4A5P29400 AC090151.1-201ENST00000520784 730 ntBASIC4.83□□□□□ -1.64
COL4A5P29400 MTND1P6-201ENST00000523621 946 ntBASIC4.83□□□□□ -1.64
COL4A5P29400 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.83□□□□□ -1.64
COL4A5P29400 AC091516.1-201ENST00000549191 703 ntBASIC4.83□□□□□ -1.64
COL4A5P29400 AC107016.1-201ENST00000550463 337 ntBASIC4.83□□□□□ -1.64
COL4A5P29400 AC106782.4-201ENST00000568264 210 ntBASIC4.83□□□□□ -1.64
COL4A5P29400 ZNF415P1-201ENST00000582279 1166 ntBASIC4.83□□□□□ -1.64
COL4A5P29400 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC4.83□□□□□ -1.64
COL4A5P29400 AL031666.3-201ENST00000609320 1006 ntBASIC4.83□□□□□ -1.64
COL4A5P29400 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.83□□□□□ -1.64
COL4A5P29400 AC064801.1-201ENST00000612025 407 ntBASIC4.83□□□□□ -1.64
COL4A5P29400 AC005344.1-201ENST00000613391 459 ntBASIC4.83□□□□□ -1.64
COL4A5P29400 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.83□□□□□ -1.64
COL4A5P29400 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC4.83□□□□□ -1.64
COL4A5P29400 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms