Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC8.07□□□□□ -1.12
PTPREP23469 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC8.07□□□□□ -1.12
PTPREP23469 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC8.07□□□□□ -1.12
PTPREP23469 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC8.07□□□□□ -1.12
PTPREP23469 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
PTPREP23469 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC8.06□□□□□ -1.12
PTPREP23469 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
PTPREP23469 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
PTPREP23469 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC8.06□□□□□ -1.12
PTPREP23469 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
PTPREP23469 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC8.06□□□□□ -1.12
PTPREP23469 AC104837.1-201ENST00000444644 1587 ntBASIC8.06□□□□□ -1.12
PTPREP23469 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC8.06□□□□□ -1.12
PTPREP23469 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
PTPREP23469 FTO-222ENST00000637969 2889 ntTSL 5 BASIC8.06□□□□□ -1.12
PTPREP23469 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC8.06□□□□□ -1.12
PTPREP23469 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
PTPREP23469 OR6M2P-202ENST00000641780 2063 ntBASIC8.06□□□□□ -1.12
PTPREP23469 FANCD2P2-201ENST00000437591 1400 ntBASIC8.06□□□□□ -1.12
PTPREP23469 RNU6-169P-201ENST00000365336 107 ntBASIC8.06□□□□□ -1.12
PTPREP23469 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
PTPREP23469 AL034403.1-201ENST00000399414 885 ntBASIC8.06□□□□□ -1.12
PTPREP23469 AL359715.1-201ENST00000404330 555 ntBASIC8.06□□□□□ -1.12
PTPREP23469 Z93019.1-201ENST00000416450 973 ntBASIC8.06□□□□□ -1.12
PTPREP23469 AC092634.6-201ENST00000418558 192 ntBASIC8.06□□□□□ -1.12
PTPREP23469 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC8.06□□□□□ -1.12
PTPREP23469 AC018804.1-201ENST00000430381 618 ntBASIC8.06□□□□□ -1.12
PTPREP23469 MYL6P3-201ENST00000436904 432 ntBASIC8.06□□□□□ -1.12
PTPREP23469 DNAJC19P5-201ENST00000443295 316 ntBASIC8.06□□□□□ -1.12
PTPREP23469 RPL21P23-201ENST00000446654 460 ntBASIC8.06□□□□□ -1.12
PTPREP23469 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC8.06□□□□□ -1.12
PTPREP23469 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC8.06□□□□□ -1.12
PTPREP23469 RPL7P15-201ENST00000461190 712 ntBASIC8.06□□□□□ -1.12
PTPREP23469 RN7SL834P-201ENST00000461450 286 ntBASIC8.06□□□□□ -1.12
PTPREP23469 RPS14P8-201ENST00000478778 369 ntBASIC8.06□□□□□ -1.12
PTPREP23469 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC8.06□□□□□ -1.12
PTPREP23469 AC091965.3-201ENST00000506236 208 ntBASIC8.06□□□□□ -1.12
PTPREP23469 RNU6-1220P-201ENST00000517126 108 ntBASIC8.06□□□□□ -1.12
PTPREP23469 AP003072.2-201ENST00000527756 676 ntBASIC8.06□□□□□ -1.12
PTPREP23469 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC8.06□□□□□ -1.12
PTPREP23469 APPL2-203ENST00000546731 684 ntTSL 2 BASIC8.06□□□□□ -1.12
PTPREP23469 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC8.06□□□□□ -1.12
PTPREP23469 AC068831.4-201ENST00000556118 109 ntBASIC8.06□□□□□ -1.12
PTPREP23469 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC8.06□□□□□ -1.12
PTPREP23469 AC023827.2-201ENST00000566880 1061 ntBASIC8.06□□□□□ -1.12
PTPREP23469 PPIAP14-201ENST00000577627 496 ntBASIC8.06□□□□□ -1.12
PTPREP23469 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC8.06□□□□□ -1.12
PTPREP23469 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
PTPREP23469 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC8.06□□□□□ -1.12
PTPREP23469 AC063962.1-201ENST00000608199 521 ntBASIC8.06□□□□□ -1.12
PTPREP23469 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC8.06□□□□□ -1.12
PTPREP23469 AC005858.3-201ENST00000624756 589 ntBASIC8.06□□□□□ -1.12
PTPREP23469 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC8.06□□□□□ -1.12
PTPREP23469 VPS35P1-201ENST00000563400 1518 ntBASIC8.06□□□□□ -1.12
PTPREP23469 AC102941.1-201ENST00000567616 1537 ntBASIC8.06□□□□□ -1.12
PTPREP23469 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC8.06□□□□□ -1.12
PTPREP23469 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
PTPREP23469 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
PTPREP23469 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
PTPREP23469 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
PTPREP23469 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC8.06□□□□□ -1.12
PTPREP23469 MFF-206ENST00000392059 1710 ntTSL 5 BASIC8.06□□□□□ -1.12
PTPREP23469 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
PTPREP23469 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
PTPREP23469 PNPT1P2-201ENST00000456768 2050 ntBASIC8.06□□□□□ -1.12
PTPREP23469 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC8.06□□□□□ -1.12
PTPREP23469 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
PTPREP23469 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC8.05□□□□□ -1.12
PTPREP23469 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC8.05□□□□□ -1.12
PTPREP23469 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC8.05□□□□□ -1.12
PTPREP23469 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
PTPREP23469 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
PTPREP23469 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC8.05□□□□□ -1.12
PTPREP23469 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC8.05□□□□□ -1.12
PTPREP23469 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
PTPREP23469 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC8.05□□□□□ -1.12
PTPREP23469 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
PTPREP23469 AC092821.2-201ENST00000545710 2042 ntBASIC8.05□□□□□ -1.12
PTPREP23469 CASC19-260ENST00000641828 2001 ntBASIC8.05□□□□□ -1.12
PTPREP23469 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
PTPREP23469 AC012213.2-201ENST00000562917 4597 ntBASIC8.05□□□□□ -1.12
PTPREP23469 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC8.05□□□□□ -1.12
PTPREP23469 AL034417.4-202ENST00000642135 2236 ntBASIC8.05□□□□□ -1.12
PTPREP23469 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
PTPREP23469 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
PTPREP23469 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
PTPREP23469 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC8.05□□□□□ -1.12
PTPREP23469 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
PTPREP23469 ATP5A1P4-201ENST00000556888 1605 ntBASIC8.05□□□□□ -1.12
PTPREP23469 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
PTPREP23469 AC010894.1-201ENST00000313760 361 ntBASIC8.05□□□□□ -1.12
PTPREP23469 MORN2-203ENST00000409131 544 ntTSL 5 BASIC8.05□□□□□ -1.12
PTPREP23469 AL590806.1-201ENST00000415818 853 ntBASIC8.05□□□□□ -1.12
PTPREP23469 THEM7P-201ENST00000419556 672 ntBASIC8.05□□□□□ -1.12
PTPREP23469 RAC1P6-201ENST00000423911 575 ntBASIC8.05□□□□□ -1.12
PTPREP23469 AL161722.2-201ENST00000434731 981 ntBASIC8.05□□□□□ -1.12
PTPREP23469 RSU1P2-202ENST00000437884 485 ntBASIC8.05□□□□□ -1.12
PTPREP23469 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC8.05□□□□□ -1.12
PTPREP23469 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC8.05□□□□□ -1.12
PTPREP23469 AL356010.1-201ENST00000456364 102 ntBASIC8.05□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms