Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 MIR7151-201ENST00000617477 60 ntBASIC3.38□□□□□ -1.87
CCL3L1P16619 AC090506.2-201ENST00000624521 419 ntBASIC3.38□□□□□ -1.87
CCL3L1P16619 AC010608.2-201ENST00000624830 470 ntBASIC3.38□□□□□ -1.87
CCL3L1P16619 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CCL3L1P16619 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CCL3L1P16619 SAMMSON-213ENST00000641336 1521 ntBASIC3.38□□□□□ -1.87
CCL3L1P16619 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CCL3L1P16619 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCL3L1P16619 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.38□□□□□ -1.87
CCL3L1P16619 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCL3L1P16619 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.37□□□□□ -1.87
CCL3L1P16619 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCL3L1P16619 OR51C1P-202ENST00000641159 1444 ntBASIC3.37□□□□□ -1.87
CCL3L1P16619 DLD-204ENST00000437604 1859 ntTSL 2 BASIC3.37□□□□□ -1.87
CCL3L1P16619 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC3.37□□□□□ -1.87
CCL3L1P16619 AC009951.1-201ENST00000623674 2614 ntBASIC3.37□□□□□ -1.87
CCL3L1P16619 SNORA70.2-201ENST00000364506 135 ntBASIC3.37□□□□□ -1.87
CCL3L1P16619 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.37□□□□□ -1.87
CCL3L1P16619 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCL3L1P16619 SNORA37-201ENST00000384504 129 ntBASIC3.37□□□□□ -1.87
CCL3L1P16619 SNORA70C-201ENST00000384538 135 ntBASIC3.37□□□□□ -1.87
CCL3L1P16619 AL022722.2-201ENST00000402519 180 ntBASIC3.37□□□□□ -1.87
CCL3L1P16619 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCL3L1P16619 RAB28P1-201ENST00000411517 641 ntBASIC3.37□□□□□ -1.87
CCL3L1P16619 HSPE1P12-201ENST00000412576 301 ntBASIC3.37□□□□□ -1.87
CCL3L1P16619 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC3.37□□□□□ -1.87
CCL3L1P16619 OR5BE1P-201ENST00000425977 939 ntBASIC3.37□□□□□ -1.87
CCL3L1P16619 AL358472.1-201ENST00000431295 329 ntBASIC3.37□□□□□ -1.87
CCL3L1P16619 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC3.37□□□□□ -1.87
CCL3L1P16619 RPL7P1-201ENST00000468161 747 ntBASIC3.37□□□□□ -1.87
CCL3L1P16619 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CCL3L1P16619 RPL7P9-201ENST00000468715 747 ntBASIC3.37□□□□□ -1.87
CCL3L1P16619 AC025554.1-201ENST00000505641 188 ntBASIC3.37□□□□□ -1.87
CCL3L1P16619 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCL3L1P16619 IGKV2D-10-201ENST00000520194 281 ntBASIC3.37□□□□□ -1.87
CCL3L1P16619 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.37□□□□□ -1.87
CCL3L1P16619 AC124068.1-201ENST00000563131 678 ntBASIC3.37□□□□□ -1.87
CCL3L1P16619 AC025627.2-201ENST00000576220 160 ntBASIC3.37□□□□□ -1.87
CCL3L1P16619 AC012417.1-201ENST00000582307 1039 ntBASIC3.37□□□□□ -1.87
CCL3L1P16619 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.37□□□□□ -1.87
CCL3L1P16619 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.37□□□□□ -1.87
CCL3L1P16619 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.37□□□□□ -1.87
CCL3L1P16619 AC114878.2-201ENST00000604863 1251 ntBASIC3.37□□□□□ -1.87
CCL3L1P16619 AC008785.1-201ENST00000624475 456 ntBASIC3.37□□□□□ -1.87
CCL3L1P16619 AP005264.7-201ENST00000625003 745 ntBASIC3.37□□□□□ -1.87
CCL3L1P16619 OR5BE1P-202ENST00000641168 1176 ntBASIC3.37□□□□□ -1.87
CCL3L1P16619 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCL3L1P16619 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
CCL3L1P16619 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
CCL3L1P16619 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.37□□□□□ -1.87
CCL3L1P16619 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC3.37□□□□□ -1.87
CCL3L1P16619 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.37□□□□□ -1.87
CCL3L1P16619 MARK2P15-201ENST00000432204 2186 ntBASIC3.36□□□□□ -1.87
CCL3L1P16619 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.36□□□□□ -1.87
CCL3L1P16619 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.36□□□□□ -1.87
CCL3L1P16619 HSPD1P11-201ENST00000508643 1702 ntBASIC3.36□□□□□ -1.87
CCL3L1P16619 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCL3L1P16619 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.36□□□□□ -1.87
CCL3L1P16619 ZNF962P-201ENST00000443465 3140 ntBASIC3.36□□□□□ -1.87
CCL3L1P16619 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC3.36□□□□□ -1.87
CCL3L1P16619 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCL3L1P16619 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.36□□□□□ -1.87
CCL3L1P16619 RNA5SP52-201ENST00000362448 134 ntBASIC3.36□□□□□ -1.87
CCL3L1P16619 MT-RNR1-201ENST00000389680 954 ntBASIC3.36□□□□□ -1.87
CCL3L1P16619 EIF4A1P3-201ENST00000411521 244 ntBASIC3.36□□□□□ -1.87
CCL3L1P16619 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC3.36□□□□□ -1.87
CCL3L1P16619 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCL3L1P16619 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC3.36□□□□□ -1.87
CCL3L1P16619 EIF4EP1-201ENST00000422311 642 ntBASIC3.36□□□□□ -1.87
CCL3L1P16619 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.36□□□□□ -1.87
CCL3L1P16619 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC3.36□□□□□ -1.87
CCL3L1P16619 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.36□□□□□ -1.87
CCL3L1P16619 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC3.36□□□□□ -1.87
CCL3L1P16619 AL356276.2-201ENST00000435919 558 ntBASIC3.36□□□□□ -1.87
CCL3L1P16619 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.36□□□□□ -1.87
CCL3L1P16619 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.36□□□□□ -1.87
CCL3L1P16619 SEPT7P3-201ENST00000455017 621 ntBASIC3.36□□□□□ -1.87
CCL3L1P16619 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CCL3L1P16619 AC092593.2-201ENST00000513866 913 ntBASIC3.36□□□□□ -1.87
CCL3L1P16619 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.36□□□□□ -1.87
CCL3L1P16619 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.36□□□□□ -1.87
CCL3L1P16619 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.36□□□□□ -1.87
CCL3L1P16619 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCL3L1P16619 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.36□□□□□ -1.87
CCL3L1P16619 AC079171.1-201ENST00000568788 914 ntBASIC3.36□□□□□ -1.87
CCL3L1P16619 AC095038.2-201ENST00000621464 1070 ntBASIC3.36□□□□□ -1.87
CCL3L1P16619 AC105105.5-201ENST00000622635 1294 ntBASIC3.36□□□□□ -1.87
CCL3L1P16619 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCL3L1P16619 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CCL3L1P16619 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCL3L1P16619 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
CCL3L1P16619 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCL3L1P16619 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.36□□□□□ -1.87
CCL3L1P16619 AP000756.2-201ENST00000624168 2567 ntBASIC3.36□□□□□ -1.87
CCL3L1P16619 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.36□□□□□ -1.87
CCL3L1P16619 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCL3L1P16619 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCL3L1P16619 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.35□□□□□ -1.87
CCL3L1P16619 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
CCL3L1P16619 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms