Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDH1P12830 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDH1P12830 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CDH1P12830 SAMMSON-226ENST00000642089 1582 ntBASIC4.67□□□□□ -1.66
CDH1P12830 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDH1P12830 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.67□□□□□ -1.66
CDH1P12830 ZNF29P-201ENST00000225587 168 ntBASIC4.67□□□□□ -1.66
CDH1P12830 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CDH1P12830 SNORD56.4-201ENST00000363883 71 ntBASIC4.67□□□□□ -1.66
CDH1P12830 SNORA74A-201ENST00000364089 198 ntBASIC4.67□□□□□ -1.66
CDH1P12830 AL034403.1-201ENST00000399414 885 ntBASIC4.67□□□□□ -1.66
CDH1P12830 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDH1P12830 AL109941.1-201ENST00000401925 229 ntBASIC4.67□□□□□ -1.66
CDH1P12830 AC008173.1-201ENST00000418901 264 ntBASIC4.67□□□□□ -1.66
CDH1P12830 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.67□□□□□ -1.66
CDH1P12830 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.67□□□□□ -1.66
CDH1P12830 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CDH1P12830 PA2G4P6-201ENST00000438325 1197 ntBASIC4.67□□□□□ -1.66
CDH1P12830 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.67□□□□□ -1.66
CDH1P12830 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.67□□□□□ -1.66
CDH1P12830 OTX2P1-201ENST00000450956 354 ntBASIC4.67□□□□□ -1.66
CDH1P12830 AC010733.1-201ENST00000451515 401 ntBASIC4.67□□□□□ -1.66
CDH1P12830 RPL7P61-201ENST00000451721 751 ntBASIC4.67□□□□□ -1.66
CDH1P12830 ZNF736P8Y-201ENST00000451913 669 ntBASIC4.67□□□□□ -1.66
CDH1P12830 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.67□□□□□ -1.66
CDH1P12830 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.67□□□□□ -1.66
CDH1P12830 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC4.67□□□□□ -1.66
CDH1P12830 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CDH1P12830 RPL7AP10-201ENST00000481016 791 ntBASIC4.67□□□□□ -1.66
CDH1P12830 RPL32P9-201ENST00000487963 407 ntBASIC4.67□□□□□ -1.66
CDH1P12830 TPT1P3-201ENST00000492841 512 ntBASIC4.67□□□□□ -1.66
CDH1P12830 RN7SL558P-201ENST00000497468 299 ntBASIC4.67□□□□□ -1.66
CDH1P12830 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.67□□□□□ -1.66
CDH1P12830 NDUFA5P12-201ENST00000503796 343 ntBASIC4.67□□□□□ -1.66
CDH1P12830 AC093720.1-201ENST00000505681 714 ntBASIC4.67□□□□□ -1.66
CDH1P12830 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.67□□□□□ -1.66
CDH1P12830 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.67□□□□□ -1.66
CDH1P12830 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.67□□□□□ -1.66
CDH1P12830 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.67□□□□□ -1.66
CDH1P12830 RNU6-709P-201ENST00000517257 104 ntBASIC4.67□□□□□ -1.66
CDH1P12830 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.67□□□□□ -1.66
CDH1P12830 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.67□□□□□ -1.66
CDH1P12830 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.67□□□□□ -1.66
CDH1P12830 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.67□□□□□ -1.66
CDH1P12830 AC010735.1-201ENST00000567305 1026 ntBASIC4.67□□□□□ -1.66
CDH1P12830 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.67□□□□□ -1.66
CDH1P12830 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.67□□□□□ -1.66
CDH1P12830 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.67□□□□□ -1.66
CDH1P12830 AC084373.1-201ENST00000603311 235 ntBASIC4.67□□□□□ -1.66
CDH1P12830 AL021707.7-201ENST00000607991 416 ntBASIC4.67□□□□□ -1.66
CDH1P12830 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.67□□□□□ -1.66
CDH1P12830 RMST_10.1-201ENST00000616309 154 ntBASIC4.67□□□□□ -1.66
CDH1P12830 AC087385.3-201ENST00000620477 187 ntBASIC4.67□□□□□ -1.66
CDH1P12830 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.67□□□□□ -1.66
CDH1P12830 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDH1P12830 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDH1P12830 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.67□□□□□ -1.66
CDH1P12830 AC131971.1-201ENST00000332881 1482 ntBASIC4.67□□□□□ -1.66
CDH1P12830 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.67□□□□□ -1.66
CDH1P12830 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.67□□□□□ -1.66
CDH1P12830 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CDH1P12830 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDH1P12830 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
CDH1P12830 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.66□□□□□ -1.66
CDH1P12830 AL672167.1-205ENST00000641112 3080 ntBASIC4.66□□□□□ -1.66
CDH1P12830 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.66□□□□□ -1.66
CDH1P12830 AC104118.1-201ENST00000607625 1589 ntBASIC4.66□□□□□ -1.66
CDH1P12830 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CDH1P12830 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.66□□□□□ -1.66
CDH1P12830 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.66□□□□□ -1.66
CDH1P12830 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CDH1P12830 RNU1-83P-201ENST00000363426 164 ntBASIC4.66□□□□□ -1.66
CDH1P12830 AP002784.2-201ENST00000397300 549 ntBASIC4.66□□□□□ -1.66
CDH1P12830 ZNF602P-201ENST00000405929 924 ntBASIC4.66□□□□□ -1.66
CDH1P12830 ATF1P1-201ENST00000406040 927 ntBASIC4.66□□□□□ -1.66
CDH1P12830 SSR1P2-201ENST00000415208 787 ntBASIC4.66□□□□□ -1.66
CDH1P12830 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.66□□□□□ -1.66
CDH1P12830 COX6B1P1-201ENST00000415962 213 ntBASIC4.66□□□□□ -1.66
CDH1P12830 RGS17P1-201ENST00000423358 553 ntBASIC4.66□□□□□ -1.66
CDH1P12830 FABP7P1-201ENST00000424004 391 ntBASIC4.66□□□□□ -1.66
CDH1P12830 AC093084.1-201ENST00000424233 687 ntBASIC4.66□□□□□ -1.66
CDH1P12830 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC4.66□□□□□ -1.66
CDH1P12830 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC4.66□□□□□ -1.66
CDH1P12830 DEFB130D-201ENST00000426866 237 ntBASIC4.66□□□□□ -1.66
CDH1P12830 RPS27P18-201ENST00000431701 247 ntBASIC4.66□□□□□ -1.66
CDH1P12830 RPS17P8-201ENST00000434525 335 ntBASIC4.66□□□□□ -1.66
CDH1P12830 ELOCP13-201ENST00000443934 329 ntBASIC4.66□□□□□ -1.66
CDH1P12830 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.66□□□□□ -1.66
CDH1P12830 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.66□□□□□ -1.66
CDH1P12830 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CDH1P12830 GAPDHP56-201ENST00000506031 988 ntBASIC4.66□□□□□ -1.66
CDH1P12830 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CDH1P12830 RNU6-276P-201ENST00000516114 96 ntBASIC4.66□□□□□ -1.66
CDH1P12830 RN7SKP34-201ENST00000516142 244 ntBASIC4.66□□□□□ -1.66
CDH1P12830 AC091163.3-201ENST00000518269 1144 ntBASIC4.66□□□□□ -1.66
CDH1P12830 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.66□□□□□ -1.66
CDH1P12830 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.66□□□□□ -1.66
CDH1P12830 AP000676.2-201ENST00000529711 301 ntBASIC4.66□□□□□ -1.66
CDH1P12830 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.66□□□□□ -1.66
CDH1P12830 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms