Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.87□□□□□ -1.63
PCNAP12004 AL158073.1-201ENST00000426848 1104 ntBASIC4.87□□□□□ -1.63
PCNAP12004 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.87□□□□□ -1.63
PCNAP12004 BX323845.1-201ENST00000432417 179 ntBASIC4.87□□□□□ -1.63
PCNAP12004 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.87□□□□□ -1.63
PCNAP12004 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.87□□□□□ -1.63
PCNAP12004 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.87□□□□□ -1.63
PCNAP12004 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.87□□□□□ -1.63
PCNAP12004 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.87□□□□□ -1.63
PCNAP12004 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PCNAP12004 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.87□□□□□ -1.63
PCNAP12004 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.87□□□□□ -1.63
PCNAP12004 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.87□□□□□ -1.63
PCNAP12004 RPS3AP6-201ENST00000484430 795 ntBASIC4.87□□□□□ -1.63
PCNAP12004 AC104687.1-201ENST00000485829 412 ntBASIC4.87□□□□□ -1.63
PCNAP12004 AC020699.1-201ENST00000505161 445 ntBASIC4.87□□□□□ -1.63
PCNAP12004 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.87□□□□□ -1.63
PCNAP12004 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.87□□□□□ -1.63
PCNAP12004 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.87□□□□□ -1.63
PCNAP12004 RN7SKP46-201ENST00000515942 234 ntBASIC4.87□□□□□ -1.63
PCNAP12004 RNU6-1028P-201ENST00000517164 93 ntBASIC4.87□□□□□ -1.63
PCNAP12004 AC105031.1-201ENST00000518550 476 ntBASIC4.87□□□□□ -1.63
PCNAP12004 IGKV2D-10-201ENST00000520194 281 ntBASIC4.87□□□□□ -1.63
PCNAP12004 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC4.87□□□□□ -1.63
PCNAP12004 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.87□□□□□ -1.63
PCNAP12004 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.87□□□□□ -1.63
PCNAP12004 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.87□□□□□ -1.63
PCNAP12004 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.87□□□□□ -1.63
PCNAP12004 ATP5F1P7-201ENST00000567330 760 ntBASIC4.87□□□□□ -1.63
PCNAP12004 MIR1269B-201ENST00000580405 75 ntBASIC4.87□□□□□ -1.63
PCNAP12004 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.87□□□□□ -1.63
PCNAP12004 ZNF92P3-201ENST00000596594 954 ntBASIC4.87□□□□□ -1.63
PCNAP12004 AC233280.2-201ENST00000603917 1070 ntBASIC4.87□□□□□ -1.63
PCNAP12004 AL450336.1-201ENST00000605180 586 ntBASIC4.87□□□□□ -1.63
PCNAP12004 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.87□□□□□ -1.63
PCNAP12004 AC004232.3-201ENST00000622977 525 ntBASIC4.87□□□□□ -1.63
PCNAP12004 AC015871.5-202ENST00000623252 701 ntBASIC4.87□□□□□ -1.63
PCNAP12004 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.87□□□□□ -1.63
PCNAP12004 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
PCNAP12004 PABPC1P6-201ENST00000445594 1829 ntBASIC4.87□□□□□ -1.63
PCNAP12004 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PCNAP12004 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PCNAP12004 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.87□□□□□ -1.63
PCNAP12004 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.87□□□□□ -1.63
PCNAP12004 AC018529.3-201ENST00000624212 2254 ntBASIC4.86□□□□□ -1.63
PCNAP12004 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCNAP12004 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCNAP12004 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCNAP12004 AC090017.1-201ENST00000548612 1779 ntBASIC4.86□□□□□ -1.63
PCNAP12004 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
PCNAP12004 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PCNAP12004 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.86□□□□□ -1.63
PCNAP12004 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PCNAP12004 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.86□□□□□ -1.63
PCNAP12004 SNORA70.10-201ENST00000384515 134 ntBASIC4.86□□□□□ -1.63
PCNAP12004 RPS24P12-201ENST00000402084 394 ntBASIC4.86□□□□□ -1.63
PCNAP12004 TAF13P2-201ENST00000416876 286 ntBASIC4.86□□□□□ -1.63
PCNAP12004 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC4.86□□□□□ -1.63
PCNAP12004 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.86□□□□□ -1.63
PCNAP12004 AC092170.1-201ENST00000440211 356 ntBASIC4.86□□□□□ -1.63
PCNAP12004 TXNP5-201ENST00000441043 315 ntBASIC4.86□□□□□ -1.63
PCNAP12004 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.86□□□□□ -1.63
PCNAP12004 AL358794.1-201ENST00000445689 381 ntBASIC4.86□□□□□ -1.63
PCNAP12004 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.86□□□□□ -1.63
PCNAP12004 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCNAP12004 AL031584.1-201ENST00000447169 754 ntBASIC4.86□□□□□ -1.63
PCNAP12004 MRPL35P2-201ENST00000448009 511 ntBASIC4.86□□□□□ -1.63
PCNAP12004 AC092647.2-201ENST00000452998 253 ntBASIC4.86□□□□□ -1.63
PCNAP12004 RNU7-140P-201ENST00000459546 60 ntBASIC4.86□□□□□ -1.63
PCNAP12004 COPS8P2-201ENST00000473228 627 ntBASIC4.86□□□□□ -1.63
PCNAP12004 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.86□□□□□ -1.63
PCNAP12004 HMGB3P16-201ENST00000508037 287 ntBASIC4.86□□□□□ -1.63
PCNAP12004 RNA5SP303-201ENST00000516192 130 ntBASIC4.86□□□□□ -1.63
PCNAP12004 RN7SKP260-201ENST00000516907 149 ntBASIC4.86□□□□□ -1.63
PCNAP12004 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.86□□□□□ -1.63
PCNAP12004 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.86□□□□□ -1.63
PCNAP12004 AC083923.1-201ENST00000523708 376 ntBASIC4.86□□□□□ -1.63
PCNAP12004 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PCNAP12004 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.86□□□□□ -1.63
PCNAP12004 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC4.86□□□□□ -1.63
PCNAP12004 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.86□□□□□ -1.63
PCNAP12004 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.86□□□□□ -1.63
PCNAP12004 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.86□□□□□ -1.63
PCNAP12004 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.86□□□□□ -1.63
PCNAP12004 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.86□□□□□ -1.63
PCNAP12004 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.86□□□□□ -1.63
PCNAP12004 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.86□□□□□ -1.63
PCNAP12004 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.86□□□□□ -1.63
PCNAP12004 BNIP3P38-201ENST00000601117 544 ntBASIC4.86□□□□□ -1.63
PCNAP12004 AC106052.1-201ENST00000608029 497 ntBASIC4.86□□□□□ -1.63
PCNAP12004 uc_338.9-201ENST00000617424 182 ntBASIC4.86□□□□□ -1.63
PCNAP12004 AC109809.1-201ENST00000619665 545 ntBASIC4.86□□□□□ -1.63
PCNAP12004 AL672167.1-205ENST00000641112 3080 ntBASIC4.86□□□□□ -1.63
PCNAP12004 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
PCNAP12004 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCNAP12004 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCNAP12004 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCNAP12004 AC091046.3-201ENST00000631455 1574 ntBASIC4.86□□□□□ -1.63
PCNAP12004 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCNAP12004 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms